Evidence map›Paper›PMID 39338923›Full record

ArticlePathogens (Basel, Switzerland)2024

Evidence for Horizontal Transmission and Recirculation of Shiga Toxin-Producing

Libby Obumneke Onyeka, Abiodun A Adesiyun, Arshad Ismail, Mushal Allam, Karen H Keddy, Peter N Thompson

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Pathogens (Basel, Switzerland), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Libby Obumneke OnyekaDepartment of Production Animal Studies, Faculty of Veterinary Science, University of Pretoria, Onderstepoort 0110, South Africa.ORCID 0000-0001-6126-2803
Abiodun A AdesiyunDepartment of Production Animal Studies, Faculty of Veterinary Science, University of Pretoria, Onderstepoort 0110, South Africa.ORCID 0000-0001-9470-9421
Arshad IsmailSequencing Core Facility, National Institute for Communicable Diseases a Division of the National Health Laboratory Service, Johannesburg 2192, South Africa.ORCID 0000-0003-4672-5915
Mushal AllamSequencing Core Facility, National Institute for Communicable Diseases a Division of the National Health Laboratory Service, Johannesburg 2192, South Africa.ORCID 0000-0002-9875-6716
Karen H KeddyDepartment of Veterinary Tropical Diseases, Faculty of Veterinary Science, University of Pretoria, Onderstepoort 0110, South Africa.ORCID 0000-0001-8640-2235
Peter N ThompsonDepartment of Production Animal Studies, Faculty of Veterinary Science, University of Pretoria, Onderstepoort 0110, South Africa.ORCID 0000-0002-2268-9748

Funding

Red Meat Research and Development South Africa and University of Pretoria, South Africa NAS2015-0116 and VET2018-0005
6 · The paper itself

Abstract

We used whole genome sequencing (WGS) as an epidemiologic surveillance tool to elucidate the transmission dynamics of Shiga toxin-producing

Indexed as

Escherichia coli InfectionsPhylogenyRed MeatShiga-Toxigenic Escherichia coliWhole Genome SequencingAbattoirsAnimalsCattleFood MicrobiologyGenome, BacterialSouth Africaantimicrobial resistance geneshorizontal transmissionmultilocus sequence typingserogenotypeSouth Africa

Identifiers

PMID39338923
PMCPMC11434950

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.