Evidence map›Paper›PMID 39338439›Full record

ArticleMicroorganisms2024

Structural and Functional Differences in Small Intestinal and Fecal Microbiota: 16S rRNA Gene Investigation in Rats.

Xiao-Wei Sun, Hong-Rui Li, Xiao-Lei Jin, Xiao Tang, Da-Wen Wang, Xiao Zhang, Jian-Gang Zhang

Abstract read
In one paragraph

Article in Microorganisms, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
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  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Xiao-Wei SunPathology Institute, School of Basic Medical Sciences, Lanzhou University, Lanzhou 730000, China.ORCID 0000-0002-6860-747X
Hong-Rui LiPathology Institute, School of Basic Medical Sciences, Lanzhou University, Lanzhou 730000, China.
Xiao-Lei JinPathology Institute, School of Basic Medical Sciences, Lanzhou University, Lanzhou 730000, China.
Xiao TangPathology Institute, School of Basic Medical Sciences, Lanzhou University, Lanzhou 730000, China.
Da-Wen WangPathology Institute, School of Basic Medical Sciences, Lanzhou University, Lanzhou 730000, China.
Xiao ZhangPathology Institute, School of Basic Medical Sciences, Lanzhou University, Lanzhou 730000, China.
Jian-Gang ZhangPathology Institute, School of Basic Medical Sciences, Lanzhou University, Lanzhou 730000, China.ORCID 0000-0002-4143-9461

Funding

National Natural Science Foundation of China 81670776Natural Science Foundation of Gansu Province 22JR5RA503
6 · The paper itself

Abstract

To compare the differences in floral composition and functions between the two types of microbiota, ileal contents and feces were collected from Sprague Dawley (SD) rats fed in a conventional or specific-pathogen free (SPF) environment and rats fed a high-fat diet (HFD), and the V3-V4 region of the 16S ribosomal ribonucleic acid (rRNA) gene in these rats was then amplified and sequenced. Compared with feces, about 60% of the bacterial genera in the ileum were exclusive, with low abundance (operational taxonomic units (OTUs) < 1000). Of bacteria shared between the ileum and feces, a few genera were highly abundant (dominant), whereas most had low abundance (less dominant). The dominant bacteria differed between the ileum and feces. Ileal bacteria showed greater β-diversity, and the distance between in-group samples was nearer than that between paired ileum-feces samples. Moreover, the ileum shared various biomarkers and functions with feces (

Indexed as

16S rRNA genefecesileummicrobiotaratssequencing

Identifiers

PMID39338439
PMCPMC11434385

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.