Evidence map›Paper›PMID 39337645›Full record

ArticleInternational journal of molecular sciences2024

Metabolite Profiling of Hydroponic Lettuce Roots Affected by Nutrient Solution Flow: Insights from Comprehensive Analysis Using Widely Targeted Metabolomics and MALDI Mass Spectrometry Imaging Approaches.

Bateer Baiyin, Yue Xiang, Yang Shao, Jung Eek Son, Kotaro Tagawa, Satoshi Yamada, Mina Yamada, Qichang Yang

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Metabolites · 2026
    Article
  3. Effects of different cultivation methods on microbial community structure of lettuce based on metagenomic analysis.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Bateer BaiyinResearch Center for Smart Horticulture Engineering, Institute of Urban Agriculture, Chinese Academy of Agricultural Sciences, Chengdu National Agricultural Science & Technology Center, Chengdu 610213, China.ORCID 0000-0002-3542-7229
Yue XiangResearch Center for Smart Horticulture Engineering, Institute of Urban Agriculture, Chinese Academy of Agricultural Sciences, Chengdu National Agricultural Science & Technology Center, Chengdu 610213, China.
Yang ShaoNational Key Laboratory of Crop Genetic Improvement, College of Plant Science & Technology, Huazhong Agricultural University, Wuhan 430070, China.
Jung Eek SonDepartment of Agriculture, Forestry and Bioresources, Seoul National University, Seoul 08826, Republic of Korea.ORCID 0000-0002-0080-0417
Kotaro TagawaFaculty of Agriculture, Tottori University, Tottori 680-8553, Japan.ORCID 0000-0003-1768-0105
Satoshi YamadaFaculty of Agriculture, Tottori University, Tottori 680-8553, Japan.
Mina YamadaFaculty of Agriculture, Tottori University, Tottori 680-8553, Japan.
Qichang YangResearch Center for Smart Horticulture Engineering, Institute of Urban Agriculture, Chinese Academy of Agricultural Sciences, Chengdu National Agricultural Science & Technology Center, Chengdu 610213, China.

Funding

Agricultural Science and Technology Innovation Program (ASTIP-CAAS)Central Public-interest Scientific Institution Basal Research Fund (No. S2024001)National Key Research and Development Program of China (2023YFF1001500)
6 · The paper itself

Abstract

Root morphology, an important determinant of nutrient absorption and plant growth, can adapt to various growth environments to promote survival. Solution flow under hydroponic conditions provides a mechanical stimulus, triggering adaptive biological responses, including altered root morphology and enhanced root growth and surface area to facilitate nutrient absorption. To clarify these mechanisms, we applied untargeted metabolomics technology, detecting 1737 substances in lettuce root samples under different flow rates, including 17 common differential metabolites. The abscisic acid metabolic pathway product dihydrophaseic acid and the amino and nucleotide sugar metabolism factor N-acetyl-d-mannosamine suggest that nutrient solution flow rate affects root organic acid and sugar metabolism to regulate root growth. Spatial metabolomics analysis of the most stressed root bases revealed significantly enriched Kyoto Encyclopedia of Genes and Genomes pathways: "biosynthesis of cofactors" and "amino sugar and nucleotide sugar metabolism". Colocalization analysis of pathway metabolites revealed a flow-dependent spatial distribution, with higher flavin mononucleotide, adenosine-5'-diphosphate, hydrogenobyrinic acid, and D-glucosamine 6-phosphate under flow conditions, the latter two showing downstream-side enrichment. In contrast, phosphoenolpyruvate, 1-phospho-alpha-D-galacturonic acid, 3-hydroxyanthranilic acid, and N-acetyl-D-galactosamine were more abundant under no-flow conditions, with the latter two concentrated on the upstream side. As metabolite distribution is associated with function, observing their spatial distribution in the basal roots will provide a more comprehensive understanding of how metabolites influence plant morphology and response to environmental changes than what is currently available in the literature.

Indexed as

HydroponicsLactucaMetabolomicsPlant RootsSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationMetabolomeNutrientsNutrientshydroponicsMALDI-MSImetabolomicsnutrient solution flowplant factoryroot morphologyurban agriculture

Identifiers

PMID39337645
PMCPMC11432021

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.