Evidence map›Paper›PMID 39337374›Full record

ArticleInternational journal of molecular sciences2024

RNA Sequencing Reveals a Strong Predominance of

Eugenio Graceffo, Robert Opitz, Matthias Megges, Heiko Krude, Markus Schuelke

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Bichromatic Splicing Detector Allows Quantification ofInternational journal of molecular sciences · 2024
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Eugenio GraceffoCharité-Universitätsmedizin Berlin, Corporate Member of Freie Universität Berlin, Humboldt-Universität Berlin, and Berlin Institute of Health, Department of Neuropediatrics, 13353 Berlin, Germany.ORCID 0000-0001-8316-1069
Robert OpitzCharité-Universitätsmedizin Berlin, Corporate Member of Freie Universität Berlin, Humboldt-Universität Berlin, and Berlin Institute of Health, Institute of Experimental Pediatric Endocrinology, 13353 Berlin, Germany.ORCID 0000-0003-3143-0997
Matthias MeggesCharité-Universitätsmedizin Berlin, Corporate Member of Freie Universität Berlin, Humboldt-Universität Berlin, and Berlin Institute of Health, Department of Pediatric Endocrinology, 13353 Berlin, Germany.ORCID 0000-0001-6537-0975
Heiko KrudeCharité-Universitätsmedizin Berlin, Corporate Member of Freie Universität Berlin, Humboldt-Universität Berlin, and Berlin Institute of Health, Institute of Experimental Pediatric Endocrinology, 13353 Berlin, Germany.ORCID 0000-0002-1169-0348
Markus SchuelkeCharité-Universitätsmedizin Berlin, Corporate Member of Freie Universität Berlin, Humboldt-Universität Berlin, and Berlin Institute of Health, Department of Neuropediatrics, 13353 Berlin, Germany.ORCID 0000-0003-2824-3891

Funding

Deutsche Forschungsgemeinschaft LocoTact, TRR 296 TP06Deutsche Forschungsgemeinschaft Neurocure Cluster of Excellence, EXC-2049-390688087
6 · The paper itself

Abstract

Thyroid hormone receptor alpha (THRα) is a nuclear hormone receptor that binds triiodothyronine (T3) and acts as an important transcription factor in development, metabolism, and reproduction. In mammals, THRα has two major splicing isoforms, THRα1 and THRα2. The better-characterized isoform, THRα1, is a transcriptional stimulator of genes involved in cell metabolism and growth. The less-well-characterized isoform, THRα2, lacks the ligand-binding domain (LBD) and is thought to act as an inhibitor of THRα1 activity. The ratio of THRα1 to THRα2 splicing isoforms is therefore critical for transcriptional regulation in different tissues and during development. However, the expression patterns of both isoforms have not been studied in healthy human tissues or in the developing brain. Given the lack of commercially available isoform-specific antibodies, we addressed this question by analyzing four bulk RNA-sequencing datasets and two scRNA-sequencing datasets to determine the RNA expression levels of human

Indexed as

Alternative SplicingBrainProtein IsoformsThyroid Hormone Receptors alphaAdultHumansRNA SplicingSequence Analysis, RNAProtein IsoformsThyroid Hormone Receptors alphaalternative splicingcentral nervous systemorganoidsRNA sequencingsingle-cell RNA analysisthyroid hormone receptor

Identifiers

PMID39337374
PMCPMC11432079

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.