Evidence map›Paper›PMID 39337322›Full record

ArticleInternational journal of molecular sciences2024

Renal Cell Carcinoma Discrimination through Attenuated Total Reflection Fourier Transform Infrared Spectroscopy of Dried Human Urine and Machine Learning Techniques.

Bogdan Adrian Buhas, Lucia Ana-Maria Muntean, Guillaume Ploussard, Bogdan Ovidiu Feciche, Iulia Andras, Valentin Toma, Teodor Andrei Maghiar, Nicolae Crișan, Rareș-Ionuț Știufiuc, Constantin Mihai Lucaciu

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Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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4 · The record

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5 · Who and what money

Authors and funding

10 authors.

Bogdan Adrian BuhasDepartment of Urology, Medicover Hospital, 323T Principala St., 407062 Suceagu, Romania.ORCID 0000-0002-5981-3802
Lucia Ana-Maria MunteanDepartment of Medical Education, Iuliu Hatieganu University of Medicine and Pharmacy, 8 Victor Babes St., 400347 Cluj-Napoca, Romania.
Guillaume PloussardDepartment of Urology, La Croix du Sud Hospital, 52 Chemin de Ribaute St., 31130 Quint-Fonsegrives, France.
Bogdan Ovidiu FecicheFaculty of Medicine and Pharmacy, University of Oradea, 1 Universitatii St., 410087 Oradea, Romania.
Iulia AndrasFaculty of Medicine, Iuliu Hatieganu University of Medicine and Pharmacy, 8 Victor Babes St., 400347 Cluj-Napoca, Romania.ORCID 0000-0002-8586-3491
Valentin TomaDepartment of Nanobiophysics, MedFuture Research Center for Advanced Medicine, Iuliu Hatieganu University of Medicine and Pharmacy, 4-6 Pasteur St., 400337 Cluj-Napoca, Romania.ORCID 0000-0001-8322-1180
Teodor Andrei MaghiarFaculty of Medicine and Pharmacy, University of Oradea, 1 Universitatii St., 410087 Oradea, Romania.
Nicolae CrișanDepartment of Urology, Medicover Hospital, 323T Principala St., 407062 Suceagu, Romania.
Rareș-Ionuț ȘtiufiucDepartment of Nanobiophysics, MedFuture Research Center for Advanced Medicine, Iuliu Hatieganu University of Medicine and Pharmacy, 4-6 Pasteur St., 400337 Cluj-Napoca, Romania.ORCID 0000-0001-6769-1545
Constantin Mihai LucaciuDepartment of Pharmaceutical Physics-Biophysics, Faculty of Pharmacy, Iuliu Hatieganu University of Medicine and Pharmacy, 6 Pasteur St., 400349 Cluj-Napoca, Romania.ORCID 0000-0002-9385-3568

Funding

Ministerul Cercetării și Inovării PN-III-P2-2.1-PED-2021-4175
6 · The paper itself

Abstract

Renal cell carcinoma (RCC) is the sixth most common cancer in men and is often asymptomatic, leading to incidental detection in advanced disease stages that are associated with aggressive histology and poorer outcomes. Various cancer biomarkers are found in urine samples from patients with RCC. In this study, we propose to investigate the use of Attenuated Total Reflection-Fourier Transform Infrared Spectroscopy (ATR-FTIR) on dried urine samples for distinguishing RCC. We analyzed dried urine samples from 49 patients with RCC, confirmed by histopathology, and 39 healthy donors using ATR-FTIR spectroscopy. The vibrational bands of the dried urine were identified by comparing them with spectra from dried artificial urine, individual urine components, and dried artificial urine spiked with urine components. Urea dominated all spectra, but smaller intensity peaks, corresponding to creatinine, phosphate, and uric acid, were also identified. Statistically significant differences between the FTIR spectra of the two groups were obtained only for creatinine, with lower intensities for RCC cases. The discrimination of RCC was performed through Principal Component Analysis combined with Linear Discriminant Analysis (PCA-LDA) and Support Vector Machine (SVM). Using PCA-LDA, we achieved a higher discrimination accuracy (82%) (using only six Principal Components to avoid overfitting), as compared to SVM (76%). Our results demonstrate the potential of urine ATR-FTIR combined with machine learning techniques for RCC discrimination. However, further studies, especially of other urological diseases, must validate this approach.

Indexed as

Carcinoma, Renal CellKidney NeoplasmsMachine LearningAdultAgedBiomarkers, TumorCreatinineDiscriminant AnalysisFemaleHumansMaleMiddle AgedPrincipal Component AnalysisSpectroscopy, Fourier Transform InfraredSupport Vector MachineUrinalysisBiomarkers, TumorCreatinineattenuated total reflection Fourier transform infrareddried urinelinear discrimination analysis–principal component analysismachine learningrenal cell carcinomasupport vector machine

Identifiers

PMID39337322
PMCPMC11432727

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.