Evidence map›Paper›PMID 39335341›Full record

ArticleAnimals : an open access journal from MDPI2024

Gut Microbiota Diversity of Local Egyptian Cattle Managed in Different Ecosystems.

Hadeer M Aboshady, Asimenia Gavriilidou, Nasser Ghanem, Mohamed A Radwan, Ahmed Elnahas, Rania Agamy, Nadia H Fahim, Mohamed H Elsawy, Al-Moataz Bellah M Shaarawy, Ahmed M Abdel-Hafeez and 6 more

Abstract read
In one paragraph

Article in Animals : an open access journal from MDPI, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Hadeer M AboshadyDepartment of Animal Production, Faculty of Agriculture, Cairo University, Giza 12613, Egypt.
Asimenia GavriilidouLaboratory of Microbiology, Wageningen University & Research, 6708 WE Wageningen, The Netherlands.ORCID 0000-0003-0204-2223
Nasser GhanemDepartment of Animal Production, Faculty of Agriculture, Cairo University, Giza 12613, Egypt.ORCID 0000-0002-0480-0959
Mohamed A RadwanDepartment of Animal Production, Faculty of Agriculture, Cairo University, Giza 12613, Egypt.ORCID 0000-0001-8793-9659
Ahmed ElnahasAnimal Production Department, Faculty of Agriculture, Sohag University, Sohag 82524, Egypt.
Rania AgamyDepartment of Animal Production, Faculty of Agriculture, Cairo University, Giza 12613, Egypt.
Nadia H FahimDepartment of Animal Production, Faculty of Agriculture, Cairo University, Giza 12613, Egypt.ORCID 0000-0002-0380-2338
Mohamed H ElsawyDepartment of Cattle, Animal Production Research Institute, Agriculture Research Center, Dokki, Giza 12618, Egypt.
Al-Moataz Bellah M ShaarawyDepartment of Cattle, Animal Production Research Institute, Agriculture Research Center, Dokki, Giza 12618, Egypt.
Ahmed M Abdel-HafeezDepartment of Cattle, Animal Production Research Institute, Agriculture Research Center, Dokki, Giza 12618, Egypt.
Juha KantanenNatural Resources Institute Finland, 31600 Jokioinen, Finland.ORCID 0000-0001-6350-6373
Catarina GinjaCIISA, Faculty of Veterinary Medicine, University of Lisbon, 1300-477 Lisboa, Portugal.ORCID 0000-0003-2278-7089
Mahlako L MakgahlelaAgricultural Research Council, Animal Production, Private Bag X2, Irene 0062, South Africa.ORCID 0000-0003-1275-4558
Donald R KugonzaSchool of Agricultural Sciences, College of Agricultural and Environmental Sciences, Makerere University, Kampala P.O. Box 7062, Uganda.ORCID 0000-0002-4873-6637
Rayner Gonzalez-PrendesAnimal Breeding and Genomics, Wageningen University & Research, 6700 AH Wageningen, The Netherlands.ORCID 0000-0003-3679-4685
Richard P M A CrooijmansAnimal Breeding and Genomics, Wageningen University & Research, 6700 AH Wageningen, The Netherlands.

Funding

Science, Technology & Innovation Funding Authority (STDF), Egypt, LEAP-Agri 326
6 · The paper itself

Abstract

The animal gastrointestinal tract contains a complex microbiome whose composition ultimately reflects the co-evolution of microorganisms with their animal host and their host's environment. This study aimed to gain insights into the adaptation of the microbiota of local Egyptian cattle to three different ecosystems (Upper Egypt, Middle Egypt, and Lower Egypt) distributed across 11 governorates (with an average of 12 animals per governorate) using amplicon sequencing. We analyzed the microbiota from 136 fecal samples of local Egyptian cattle through a 16S rRNA gene sequencing approach to better understand the fecal microbial diversity of this breed which developed under different ecosystems. An alpha diversity analysis showed that the fecal microbiota of the Egyptian cattle was not significantly diverse across areas, seasons, sexes, or farm types. Meanwhile, microbiota data revealed significant differences in richness among age groups (

Indexed as

16S rRNA sequencingbiodiversitylocal breedprokaryotes

Identifiers

PMID39335341
PMCPMC11428623

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.