Evidence map›Paper›PMID 39334706›Full record

ArticleAntioxidants (Basel, Switzerland)2024

Extracellular Vesicle-Enclosed Oxidative Stress- and Inflammation-Related microRNAs as Potential Biomarkers of Vitamin D Responsivity: A Pilot Study on Inflammatory Bowel Disease Patients with or without COVID-19.

Giorgia Ammirata, Maddalena Arigoni, Danilo Licastro, Gian Paolo Caviglia, Michela Disabato, Ghania Zubair, Cristina Bezzio, Simone Saibeni, Amedeo De Nicolò, Jessica Cusato and 10 more

Abstract read
In one paragraph

Article in Antioxidants (Basel, Switzerland), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Giorgia AmmirataDepartment of Molecular Biotechnology and Health Sciences, Molecular Biotechnology Centre "Guido Tarone", University of Turin, 10126 Turin, Italy.
Maddalena ArigoniDepartment of Molecular Biotechnology and Health Sciences, Molecular Biotechnology Centre "Guido Tarone", University of Turin, 10126 Turin, Italy.
Danilo LicastroAREA Science Park, Padriciano, 34149 Trieste, Italy.
Gian Paolo CavigliaGastroenterology Unit, Department of Medical Sciences, University of Turin, 10126 Turin, Italy.ORCID 0000-0002-0529-9481
Michela DisabatoGastroenterology Unit, Department of Medical Sciences, University of Turin, 10126 Turin, Italy.
Ghania ZubairDepartment of Mathematics "Giuseppe Peano", University of Turin, 10126 Turin, Italy.
Cristina BezzioIBD Centre, IRCCS Humanitas Research Hospital, 20089 Rozzano, Italy.ORCID 0000-0003-0076-8549
Simone SaibeniGastroenterology Unit, Rho Hospital, ASST Rhodense, 20017 Milan, Italy.ORCID 0000-0001-5677-2534
Amedeo De NicolòLaboratory of Clinical Pharmacology and Pharmacogenetics, Department of Medical Sciences, University of Turin, 10149 Turin, Italy.ORCID 0000-0002-5973-9948
Jessica CusatoLaboratory of Clinical Pharmacology and Pharmacogenetics, Department of Medical Sciences, University of Turin, 10149 Turin, Italy.ORCID 0000-0003-1977-9694
Alice PalermitiLaboratory of Clinical Pharmacology and Pharmacogenetics, Department of Medical Sciences, University of Turin, 10149 Turin, Italy.ORCID 0000-0003-0860-280X
Alessandra MancaLaboratory of Clinical Pharmacology and Pharmacogenetics, Department of Medical Sciences, University of Turin, 10149 Turin, Italy.ORCID 0000-0002-8540-6709
Emanuela TolosanoDepartment of Molecular Biotechnology and Health Sciences, Molecular Biotechnology Centre "Guido Tarone", University of Turin, 10126 Turin, Italy.ORCID 0000-0002-1622-2340
Stefano CozziniAREA Science Park, Padriciano, 34149 Trieste, Italy.
Marcello ManciniInstitute for Biostructure and Bioimaging, CNR, Via T. De Amicis 95, 80145 Naples, Italy.
Fiorella AltrudaDepartment of Molecular Biotechnology and Health Sciences, Molecular Biotechnology Centre "Guido Tarone", University of Turin, 10126 Turin, Italy.ORCID 0000-0002-6238-1860
Antonio D'AvolioLaboratory of Clinical Pharmacology and Pharmacogenetics, Department of Medical Sciences, University of Turin, 10149 Turin, Italy.ORCID 0000-0002-1321-4126
Davide Giuseppe RibaldoneGastroenterology Unit, Department of Medical Sciences, University of Turin, 10126 Turin, Italy.ORCID 0000-0002-9421-3087
Ugo AlaDepartment of Veterinary Sciences, University of Turin, Grugliasco, 10095 Turin, Italy.ORCID 0000-0001-5408-6397
Sharmila FagooneeInstitute for Biostructure and Bioimaging, CNR, Molecular Biotechnology Centre "Guido Tarone", 10126 Turin, Italy.ORCID 0000-0001-6070-6716

Funding

Area Science Park and Piattaforma di Genomica del Sistema ARGO with the support of Regione Autonoma Friuli Venezia Giulia, Ministry of University and Research and Ministry of Economic development FAST TRACK COVID 19Ricerca Locale - Linea A - Department of Veterinary Sciences, University of Torino Ricerca Locale
6 · The paper itself

Abstract

The relationship between serum 25-hydroxyvitamin D (25(OH)D) levels, genomic response to vitamin D (Vit.D), and positivity to SARS-CoV-2 remains understudied. In this pilot study, during the follow-up of patients with Inflammatory Bowel Disease (IBD) and COVID-19, we investigated this issue by analyzing the molecular contents of serum extracellular vesicles (EVs) from six groups of IBD patients (n = 32), classified according to anti-SARS-CoV-2 status, 25(OH)D level, and Vit.D supplementation, by small RNA-seq. This analysis revealed differentially expressed miRNAs, PIWI-RNA, transfer RNA, small nucleolar RNAs, and protein-coding RNAs in the EVs obtained from these cohorts of IBD patients. Experimental validation evidenced a statistically significant increase in miR30d-5p, miR150-5p, Let-7f-5p, and Let-7a-5p in the anti-SARS-CoV-2-positive and low 25(OH)D and Vit.D supplemented groups with respect to the non-Vit.D supplemented group, indicating their responsiveness to Vit.D treatment. Bioinformatics analysis highlighted the regulation of these validated miRNAs by oxidative stress and inflammation, hallmarks of IBD and COVID-19. Our study reports an unprecedented panel of circulating EV-enclosed inflammation- and oxidative stress-related miRNAs, the potentiality of which, as biomarkers for Vit.D responsivity in IBD patients, needs to be explored in future studies on larger cohorts in order to allow clinicians to optimize current treatment strategies upon viral infection.

Indexed as

bioinformaticsbiomarkersCOVID-19Crohn’s diseaseextracellular vesiclesinflammationinflammatory bowel diseasesoxidative stressSARS-CoV-2ulcerative colitisvitamin D

Identifiers

PMID39334706
PMCPMC11429492

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.