Evidence map›Paper›PMID 39334518›Full record

ArticleJournal of natural products2024

Transcription Factor Engineering in

Chris Rabot, Michelle F Grau, Ruth Entwistle, Yi-Ming Chiang, Yamilex Zamora de Roberts, Manmeet Ahuja, C Elizabeth Oakley, Clay C C Wang, Richard B Todd, Berl R Oakley

Abstract read
In one paragraph

Article in Journal of natural products, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Chris RabotDepartment of Pharmacology and Pharmaceutical Sciences, University of Southern California, Los Angeles, California 90089, United States.ORCID 0000-0003-1183-1080
Michelle F GrauDepartment of Pharmacology and Pharmaceutical Sciences, University of Southern California, Los Angeles, California 90089, United States.ORCID 0000-0001-5930-5552
Ruth EntwistleDepartment of Molecular Biosciences, University of Kansas, Lawrence, Kansas 66045, United States.
Yi-Ming ChiangDepartment of Pharmacology and Pharmaceutical Sciences, University of Southern California, Los Angeles, California 90089, United States.
Yamilex Zamora de RobertsDepartment of Molecular Biosciences, University of Kansas, Lawrence, Kansas 66045, United States.
Manmeet AhujaDepartment of Molecular Biosciences, University of Kansas, Lawrence, Kansas 66045, United States.
C Elizabeth OakleyDepartment of Molecular Biosciences, University of Kansas, Lawrence, Kansas 66045, United States.ORCID 0000-0001-7170-4775
Clay C C WangDepartment of Pharmacology and Pharmaceutical Sciences, University of Southern California, Los Angeles, California 90089, United States.ORCID 0000-0003-2955-7569
Richard B ToddDepartment of Plant Pathology, Kansas State University, Manhattan, Kansas 66506, United States.ORCID 0000-0002-3494-948X
Berl R OakleyDepartment of Molecular Biosciences, University of Kansas, Lawrence, Kansas 66045, United States.ORCID 0000-0002-3046-8240

Funding

Resistance-gene-guided genome mining for novel antifungal compoundsR21AI156320 · NIAID · UNIVERSITY OF KANSAS LAWRENCE · PI OAKLEY, BERL RAY · 2021 to 2022
$437k
NIAID NIH HHS R21 AI156320
6 · The paper itself

Abstract

Secondary metabolites are generally produced by enzymes encoded by genes within a biosynthetic gene cluster. Transcription factor genes are frequently located within these gene clusters. These transcription factors often drive expression of the other genes of the biosynthetic gene cluster, and overexpression of the transcription factor provides a facile approach to express all genes within a gene cluster, resulting in production of downstream metabolite(s). Unfortunately this approach is not always successful, leading us to engineer more effective hybrid transcription factors. Herein, we attempted to activate a putative cryptic biosynthetic gene cluster in

Indexed as

Aspergillus nidulansMultigene FamilyPolyketide SynthasesTranscription FactorsAldehydesMolecular StructureResorcinolsAldehydesPolyketide SynthasesResorcinolsTranscription Factors

Identifiers

PMID39334518
PMCPMC12529829

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.