Evidence map›Paper›PMID 39333557›Full record

ArticleScientific reports2024

Elevated α-1,2-mannosidase MAN1C1 in glioma stem cells and its implications for immunological changes and prognosis in glioma patients.

Don Carlo Batara, Hyun-Jin Kim, Le Thi Phan, Minseo Kim, Young-Ok Son, Seongsoo Lee, Sang-Ik Park, Young Sun Choi, Samuel Beck, Sung-Hak Kim

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Don Carlo Batara *Animal Molecular Biochemistry Laboratory, Department of Animal Science, College of Agriculture and Life Sciences, Chonnam National University, Gwangju, 61186, Republic of Korea.
Hyun-Jin Kim *Animal Molecular Biochemistry Laboratory, Department of Animal Science, College of Agriculture and Life Sciences, Chonnam National University, Gwangju, 61186, Republic of Korea.
Le Thi PhanAnimal Molecular Biochemistry Laboratory, Department of Animal Science, College of Agriculture and Life Sciences, Chonnam National University, Gwangju, 61186, Republic of Korea.
Minseo KimAnimal Molecular Biochemistry Laboratory, Department of Animal Science, College of Agriculture and Life Sciences, Chonnam National University, Gwangju, 61186, Republic of Korea.
Young-Ok SonDepartment of Animal Biotechnology, Faculty of Biotechnology, College of Applied Life Sciences, Interdisciplinary Graduate Program in Advanced Convergence Technology and Science, Jeju National University, Jeju, 63243, Republic of Korea.
Seongsoo LeeGwangju Center, Korea Basic Science Institute (KBSI), 49, Dosicheomdansaneop-ro, Nam-gu, Gwangju, 61751, Republic of Korea.
Sang-Ik ParkLaboratory of Veterinary Pathology, College of Veterinary Medicine and BK21 Plus Project Team, Chonnam National University, Gwangju, 61186, Republic of Korea.
Young Sun ChoiJeollanam-do Agriculture Research and Extension Services Livestock Research Institute, Naju-si, Jeollanam-do, 58213, Republic of Korea.
Samuel BeckDepartment of Dermatology, Center for Aging Research, Chobanian & Avedisian School of Medicine, Boston University, Boston, 02118, USA. sambeck@bu.edu.
Sung-Hak KimAnimal Molecular Biochemistry Laboratory, Department of Animal Science, College of Agriculture and Life Sciences, Chonnam National University, Gwangju, 61186, Republic of Korea. sunghakkim@jnu.ac.kr.

Funding

Loss of transcriptional homeostasis of genes lacking CpG islands during agingR01AG068179 · NIA · MOUNT DESERT ISLAND BIOLOGICAL LAB · PI BECK, SAMUEL · 2021 to 2025
$2.3M
Chromatin architecture disruption and the vicious cycle of aging.R56AG082796 · NIA · BOSTON UNIVERSITY MEDICAL CAMPUS · PI BECK, SAMUEL · 2023 to 2023
$413k
Chonnam National University 2021-3975National Research Foundation of Korea 2022R1I1A3070961National Research Foundation of Korea, Regional Innovation Strategy 2021RIS-002NIA NIH HHS R01 AG068179NIA NIH HHS R56 AG082796NIH HHS R01AG068179
6 · The paper itself

Abstract

Glioblastoma multiforme (GBM) is the most aggressive type of primary brain tumor, and the presence of glioma stem cells (GSCs) has been linked to its resistance to treatments and recurrence. Additionally, aberrant glycosylation has been implicated in the aggressiveness of cancers. However, the influence and underlying mechanism of N-glycosylation on the GSC phenotype and GBM malignancy remain elusive. Here, we performed an in-silico analysis approach on publicly available datasets to examine the function of N-glycosylation-related genes in GSCs and gliomas, accompanied by a qRT-PCR validation experiment. We found that high α-1,2-mannosidase MAN1C1 is associated with immunological functions and worse survival of glioma patients. Differential gene expression analysis and qRT-PCR validation revealed that MAN1C1 is highly expressed in GSCs. Furthermore, higher MAN1C1 expression predicts worse outcomes in glioma patients. Also, MAN1C1 expression is increased in the perinecrotic region of GBM and is associated with immunological and inflammatory functions, a hallmark of the GBM mesenchymal subtype. Further analysis confirmed that MAN1C1 expression is closely associated with infiltrating immune cells and disrupted immune response in the GBM microenvironment. These suggest that MAN1C1 is a potential biomarker for gliomas and may be important as an immunotherapeutic target for GBM.

Indexed as

Brain NeoplasmsGliomaMannosidasesNeoplastic Stem CellsBiomarkers, TumorFemaleGene Expression Regulation, NeoplasticGlioblastomaGlycosylationHumansMalePrognosisTumor MicroenvironmentBiomarkers, TumorMannosidasesmannosyl-oligosaccharide 1,2-alpha-mannosidaseBiomarkerGlioblastomaGlioma stem cellImmuneMAN1C1Transcriptomics

Identifiers

PMID39333557
PMCPMC11436702

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.