Evidence map›Paper›PMID 39333427›Full record

ArticleEuropean journal of human genetics : EJHG2025

Chromatin assembly factor subunit CHAF1A as a monogenic cause for oculo-auriculo-vertebral spectrum.

Véronique Pingault, Cécilia Neiva-Vaz, Judite de Oliveira, Núria Martínez-Gil, Amaia Lasa-Aranzasti, Berta Campos, Inge M M Lakeman, Esther A R Nibbeling, Radka Stoeva, Parul Jayakar and 8 more

Abstract readCase Reports
In one paragraph

Article in European journal of human genetics : EJHG, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Véronique PingaultLaboratoire « Embryologie et Génétique des Malformations », Institut Imagine, INSERM UMR1163, Université Paris Cité, Paris, France. veronique.pingault@inserm.fr.ORCID 0000-0001-7064-0765
Cécilia Neiva-VazChirurgie Maxillofaciale, Hôpital Necker-Enfants Malades, AP-HP Centre, Paris, France.
Judite de OliveiraService de Médecine Génomique des maladies rares, AP-HP.Centre, Hôpital Necker-Enfants Malades, F-75015, Paris, France.
Núria Martínez-GilDepartment of Clinical and Molecular Genetics, Vall d'Hebron University Hospital, Barcelona, Spain.
Amaia Lasa-AranzastiDepartment of Clinical and Molecular Genetics, Vall d'Hebron University Hospital, Barcelona, Spain.
Berta CamposDepartment of Clinical and Molecular Genetics, Vall d'Hebron University Hospital, Barcelona, Spain.ORCID 0000-0002-4343-8331
Inge M M LakemanDepartment of Clinical Genetics, Leiden University Medical Center, Leiden, the Netherlands.ORCID 0000-0002-2990-7154
Esther A R NibbelingDepartment of Clinical Genetics, Leiden University Medical Center, Leiden, the Netherlands.ORCID 0000-0001-8818-3232
Radka StoevaDepartment of Medical Genetics, Le Mans Hospital, Le Mans, France.ORCID 0000-0002-6383-8201
Parul JayakarDivision of Genetics and Metabolism, Nicklaus Children's Hospital, Miami, FL, USA.
Tabib DabirMedical Genetics Dept, Belfast City Hospital, Belfast, BT9 7AB, UK.
Houda Zghal ElloumiGeneDx, Gaithersburg, MD, USA.
Alanna StrongDivision of Human Genetics, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Sylvain HaneinBioinformatic Platform, Institute of Genetic Diseases, INSERM UMR1163, Institut Imagine, Université Paris-Cité and Structure Fédérative de Recherche Necker, 75015, Paris, France.ORCID 0000-0001-5817-6330
Arnaud PicardChirurgie Maxillofaciale, Hôpital Necker-Enfants Malades, AP-HP Centre, Paris, France.
Francoise OchsenbeinUniversité Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), Institute Joliot, Gif-sur-Yvette, France.
Pierre BlancLaboratoire de Biologie Médicale Multi-Sites SeqOIA, Paris, France.ORCID 0009-0003-8965-7171
Jeanne AmielLaboratoire « Embryologie et Génétique des Malformations », Institut Imagine, INSERM UMR1163, Université Paris Cité, Paris, France.

Funding

Wellcome Trust
6 · The paper itself

Abstract

Oculo-auriculo-vertebral spectrum (OAVS) is characterized by abnormal development of the 1st and 2nd branchial arches. Despite arguments against a monogenic condition, a few genes have been involved in a minority of cases. We now report heterozygous, presumably loss-of function variants in the CHAF1A gene in 8 individuals, including 3 members of the same family. Four cases fulfill stringent diagnostic criteria for OAVS, including asymmetric ear dysplasia, preauricular tags, mandibular asymmetry +/- vertebral malformations. Two patients also presented with kidney malformations. CHAF1A encodes a subunit of CAF-1 (chromatin assembly factor-1), a heterotrimeric protein complex responsible for the deposition of newly synthesized histones H3-H4 onto the newly synthetized DNA strand during replication. The identification of loss-of-unction variants in CHAF1A is consistent with the hypothesis of early developmental genes dysregulation driving OAVS and other associations recently lumped under the acronym Recurrent Constellations of Embryonic Malformations (RCEM).

Indexed as

Chromatin Assembly Factor-1Goldenhar SyndromeChildChild, PreschoolFemaleHumansInfantLoss of Function MutationMalePedigreeChromatin Assembly Factor-1

Identifiers

PMID39333427
PMCPMC11711244

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.