Evidence map›Paper›PMID 39333392›Full record

ArticleNature chemistry2024

Biocatalytic asymmetric aldol addition into unactivated ketones.

Samantha K Bruffy, Anthony Meza, Jordi Soler, Tyler J Doyon, Seth H Young, Jooyeon Lim, Kathryn G Huseth, Patrick H Willoughby, Marc Garcia-Borràs, Andrew R Buller

Abstract read
In one paragraph

Article in Nature chemistry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. Promiscuity-Guided Enzyme Evolution via Substrate Multiplexed Screening.Angewandte Chemie (International ed. in English) · 2026
    Review
  3. Article
  4. Pyridoxal 5'-Phosphate-Dependent Enzymatic Decarboxylative Annulation.Journal of the American Chemical Society · 2026
    Article
  5. Biocatalytic Regioselective C-Formylation of Resorcinol Derivatives.Angewandte Chemie (International ed. in English) · 2026
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Diversity of ThDP-Dependent Enzymes Forming Chiral Tertiary Alcohols.Chembiochem : a European journal of chemical biology · 2025
    Review
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Samantha K BruffyDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI, USA.
Anthony MezaDepartment of Biochemistry, University of Wisconsin-Madison, Madison, WI, USA.
Jordi SolerInstitut de Química Computacional i Catàlisi and Departament de Química, Universitat de Girona, Girona, Spain.ORCID 0000-0002-3537-4227
Tyler J DoyonDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI, USA.
Seth H YoungDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI, USA.
Jooyeon LimDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI, USA.
Kathryn G HusethDepartment of Biochemistry, University of Wisconsin-Madison, Madison, WI, USA.
Patrick H WilloughbyDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI, USA.ORCID 0000-0001-5163-0502
Marc Garcia-BorràsInstitut de Química Computacional i Catàlisi and Departament de Química, Universitat de Girona, Girona, Spain. marc.garcia@udg.edu.ORCID 0000-0001-9458-1114
Andrew R BullerDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI, USA. arbuller@wisc.edu.ORCID 0000-0002-9635-4844

Funding

BIOTECHNOLOGY TRAINING PROGRAMT32GM008349 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI FOX, BRIAN G · 1989 to 2019
$22.5M
Chemistry-Biology Interface Training ProgramT32GM008505 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI BLACKWELL, HELEN E. · 1993 to 2023
$9.8M
Engineering in vivo biomolecular synthesis with non-standard building blocksDP2GM137417 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI BULLER, ANDREW · 2019 to 2019
$2.2M
Chemistry-Biology Interface Training ProgramT32GM152341 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI Helen E. Blackwell · 2024 to 2026
$1.6M
NIGMS NIH HHS DP2 GM137417NIGMS NIH HHS T32 GM008349NIGMS NIH HHS T32 GM008505NIGMS NIH HHS T32 GM152341U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) DP2-GM137417U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) T32-GM008349U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) T32-GM008505
6 · The paper itself

Abstract

Enzymes are renowned for their catalytic efficiency and selectivity, but many classical transformations in organic synthesis have no biocatalytic counterpart. Aldolases are prodigious C-C bond-forming enzymes, but their reactivity has only been extended past activated carbonyl electrophiles in special cases. To probe the mechanistic origins of this limitation, we use a pair of aldolases whose activity is dependent on pyridoxal phosphate. Our results reveal how aldolases are limited by kinetically favourable proton transfer with solvent, which undermines aldol addition into ketones. We show how a transaldolase can circumvent this limitation, enabling efficient addition into unactivated ketones. The resulting products are highly sought non-canonical amino acids with side chains that contain chiral tertiary alcohols. Mechanistic analysis reveals that transaldolase activity is an intrinsic feature of pyridoxal phosphate chemistry and identifies principles for extending aldolase catalysis beyond its previous limits to enable convergent, enantioselective C-C bond formation from simple starting materials.

Indexed as

AldehydesBiocatalysisKetonesAlcoholsAldehyde-LyasesKineticsPyridoxal PhosphateStereoisomerism3-hydroxybutanalAlcoholsAldehyde-LyasesAldehydesKetonesPyridoxal Phosphate

Identifiers

PMID39333392
PMCPMC11611667

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.