Evidence map›Paper›PMID 39331726›Full record

ArticleScience immunology2024

HDAC3 integrates TGF-β and microbial cues to program tuft cell biogenesis and diurnal rhythms in mucosal immune surveillance.

Jianglin Zhang, Guoxun Wang, Junjie Ma, Yiran Duan, Samskrathi A Sharma, Sarah Oladejo, Xianda Ma, Giselle Arellano, Robert C Orchard, Tiffany A Reese and 1 more

Abstract read
In one paragraph

Article in Science immunology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
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  5. Review
  6. Article
  7. Circadian clock and cancer.Military Medical Research · 2026
    Review
  8. Review
  9. Review
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Jianglin ZhangDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA 15213, USA.ORCID 0009-0005-3847-8661
Guoxun WangDepartment of Immunology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.ORCID 0000-0002-8033-5980
Junjie MaDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA 15213, USA.ORCID 0009-0009-7855-8470
Yiran DuanDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Samskrathi A SharmaDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA 15213, USA.ORCID 0009-0002-4259-0590
Sarah OladejoDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Xianda MaDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Giselle ArellanoDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA 15213, USA.ORCID 0009-0006-8432-6519
Robert C OrchardDepartment of Immunology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Tiffany A ReeseDepartment of Immunology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.ORCID 0000-0003-2325-6546
Zheng KuangDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA 15213, USA.ORCID 0000-0001-5855-8371

Funding

Microbial regulation of mammalian circadian rhythms and the sexual dimorphism: from metabolism to immunityDP2DK136278 · NIDDK · CARNEGIE-MELLON UNIVERSITY · PI KUANG, ZHENG · 2022 to 2025
$2.3M
Microbiota-dependent Epigenetic Regulation of Circadian Rhythms in Nutrient Uptake and Energy HomeostasisR00DK120897 · NIDDK · CARNEGIE-MELLON UNIVERSITY · PI KUANG, ZHENG · 2021 to 2023
$735k
Microbiota-dependent Epigenetic Regulation of Circadian Rhythms in Nutrient Uptake and Energy HomeostasisK99DK120897 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI KUANG, ZHENG · 2019 to 2020
$182k
NIDDK NIH HHS DP2 DK136278NIDDK NIH HHS K99 DK120897NIDDK NIH HHS R00 DK120897
6 · The paper itself

Abstract

The intestinal mucosal surface is directly exposed to daily fluctuations in food and microbes driven by 24-hour light and feeding cycles. Intestinal epithelial tuft cells are key sentinels that surveil the gut luminal environment, but how these cells are diurnally programmed remains unknown. Here, we show that histone deacetylase 3 (HDAC3) controls tuft cell specification and the diurnal rhythm of its biogenesis, which is regulated by the gut microbiota and feeding schedule. Disruption of epithelial HDAC3 decreases tuft cell numbers, impairing antihelminth immunity and norovirus infection. Mechanistically, HDAC3 functions noncanonically to activate transforming growth factor-β (TGF-β) signaling, which promotes rhythmic expression of

Indexed as

Circadian RhythmHistone DeacetylasesIntestinal MucosaTransforming Growth Factor betaAnimalsFemaleGastrointestinal MicrobiomeHistone Deacetylase 3Immunity, MucosalImmunologic SurveillanceMaleMiceMice, Inbred C57BLMice, KnockoutTuft CellsHistone Deacetylase 3Histone DeacetylasesTransforming Growth Factor beta

Identifiers

PMID39331726
PMCPMC13337329

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.