Evidence map›Paper›PMID 39329745›Full record

ReviewCells2024

Single-Cell Transcriptomics Applied in Plants.

Yanyan Sun, Jian Sun, Chunjing Lin, Jingyong Zhang, Hao Yan, Zheyun Guan, Chunbao Zhang

Abstract readReview
In one paragraph

Review in Cells, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Review
  3. Single-Cell/Nucleus RNA-Sequencing for Phytohormone Signaling in Plants.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yanyan SunSoybean Research Institute, Jilin Academy of Agricultural Sciences, Changchun 130033, China.
Jian SunInstitute of Agricultural Quality Standard and Testing Technology, Jilin Academy of Agricultural Sciences, Changchun 130033, China.
Chunjing LinSoybean Research Institute, Jilin Academy of Agricultural Sciences, Changchun 130033, China.
Jingyong ZhangSoybean Research Institute, Jilin Academy of Agricultural Sciences, Changchun 130033, China.
Hao YanSoybean Research Institute, Jilin Academy of Agricultural Sciences, Changchun 130033, China.
Zheyun GuanSoybean Research Institute, Jilin Academy of Agricultural Sciences, Changchun 130033, China.
Chunbao ZhangSoybean Research Institute, Jilin Academy of Agricultural Sciences, Changchun 130033, China.ORCID 0000-0001-9344-9162

Funding

China Postdoctoral Science Foundation 2022MD713754National Natural Science Foundation of China 32101766, 32372149, U21A20215the earmarked Fund for China Agriculture Research System CARS-04
6 · The paper itself

Abstract

Single-cell RNA sequencing (scRNA-seq) is a high-tech method for characterizing the expression patterns of heterogeneous cells in the same tissue and has changed our evaluation of biological systems by increasing the number of individual cells analyzed. However, the full potential of scRNA-seq, particularly in plant science, has not yet been elucidated. To explore the utilization of scRNA-seq technology in plants, we firstly conducted a comprehensive review of significant scRNA-seq findings in the past few years. Secondly, we introduced the research and applications of scRNA-seq technology to plant tissues in recent years, primarily focusing on model plants, crops, and wood. We then offered five databases that could facilitate the identification of distinct expression marker genes for various cell types. Finally, we analyzed the potential problems, challenges, and directions for applying scRNA-seq in plants, with the aim of providing a theoretical foundation for the better use of this technique in future plant research.

Indexed as

PlantsSingle-Cell AnalysisTranscriptomeGene Expression ProfilingGene Expression Regulation, PlantSequence Analysis, RNAcropsdatabasesmodel plantssingle-cell RNA sequencingwood

Identifiers

PMID39329745
PMCPMC11430455

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.