Evidence map›Paper›PMID 39328302›Full record

ArticleJGH open : an open access journal of gastroenterology and hepatology2024

Exploring vision transformers for classifying early Barrett's dysplasia in endoscopic images: A pilot study on white-light and narrow-band imaging.

Jin L Tan, Dileepa Pitawela, Mohamed A Chinnaratha, Andrawus Beany, Enrik J Aguila, Hsiang-Ting Chen, Gustavo Carneiro, Rajvinder Singh

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Article in JGH open : an open access journal of gastroenterology and hepatology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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2 · The registry

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4 · The record

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5 · Who and what money

Authors and funding

8 authors.

Jin L TanDepartment of Gastroenterology and Hepatology Lyell McEwin Hospital, SA Health Elizabeth Vale South Australia Australia.ORCID https://orcid.org/0000-0002-6893-9087
Dileepa PitawelaSchool of Computer and Mathematical Sciences The University of Adelaide Adelaide South Australia Australia.ORCID https://orcid.org/0000-0002-4887-7122
Mohamed A ChinnarathaDepartment of Gastroenterology and Hepatology Lyell McEwin Hospital, SA Health Elizabeth Vale South Australia Australia.
Andrawus BeanyDepartment of Gastroenterology and Hepatology Lyell McEwin Hospital, SA Health Elizabeth Vale South Australia Australia.
Enrik J AguilaDepartment of Gastroenterology and Hepatology Lyell McEwin Hospital, SA Health Elizabeth Vale South Australia Australia.ORCID https://orcid.org/0000-0003-3440-2406
Hsiang-Ting ChenSchool of Computer and Mathematical Sciences The University of Adelaide Adelaide South Australia Australia.
Gustavo CarneiroCentre for Vision, Speech and Signal Processing University of Surrey Guildford UK.
Rajvinder SinghDepartment of Gastroenterology and Hepatology Lyell McEwin Hospital, SA Health Elizabeth Vale South Australia Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background and Aim: Various deep learning models, based on convolutional neural network (CNN), have been shown to improve the detection of early esophageal neoplasia in Barrett's esophagus. Vision transformer (ViT), derived from natural language processing, has emerged as the new state-of-the-art for image recognition, outperforming predecessors such as CNN. This pilot study explores the use of ViT to classify the presence or absence of early esophageal neoplasia in endoscopic images of Barrett's esophagus. Methods: A BO dataset of 1918 images of Barrett's esophagus from 267 unique patients was used. The images were classified as dysplastic (D-BO) or non-dysplastic (ND-BO). A pretrained vision transformer model, ViTBase16, was used to develop our classifier models. Three ViT models were developed for comparison based on imaging modality: white-light imaging (WLI), narrow-band imaging (NBI), and combined modalities. Performance of each model was evaluated based on accuracy, sensitivity, specificity, confusion matrices, and receiver operating characteristic curves. Results: The ViT models demonstrated the following performance: WLI-ViT (Accuracy: 92%, Sensitivity: 82%, Specificity: 95%), NBI-ViT (Accuracy: 99%, Sensitivity: 97%, Specificity: 99%), and combined modalities-ViT (Accuracy: 93%, Sensitivity: 87%, Specificity: 95%). Combined modalities-ViT showed greater accuracy (94% Conclusion: ViT exhibited high accuracy in classifying the presence or absence of EON in endoscopic images of Barrett's esophagus. ViT has the potential to be widely applicable to other endoscopic diagnoses of gastrointestinal diseases.

Indexed as

artificial intelligenceBarrett's esophagusdysplasiaesophageal adenocarcinomavision transformer

Identifiers

PMID39328302
PMCPMC11424823

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