Evidence map›Paper›PMID 39324436›Full record

ArticleDevelopment (Cambridge, England)2024

Analysis of auxin responses in the fern Ceratopteris richardii identifies the developmental phase as a major determinant for response properties.

Sjoerd Woudenberg, Melissa Dipp Alvarez, Juriaan Rienstra, Victor Levitsky, Victoria Mironova, Enrico Scarpella, Andre Kuhn, Dolf Weijers

Abstract read
In one paragraph

Article in Development (Cambridge, England), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Sjoerd WoudenbergLaboratory of Biochemistry, Wageningen University, Stippeneng 4, 6708WE Wageningen, The Netherlands.
Melissa Dipp AlvarezLaboratory of Biochemistry, Wageningen University, Stippeneng 4, 6708WE Wageningen, The Netherlands.ORCID 0000-0002-4638-4869
Juriaan RienstraLaboratory of Biochemistry, Wageningen University, Stippeneng 4, 6708WE Wageningen, The Netherlands.ORCID 0000-0003-4870-8078
Victor LevitskyInstitute of Cytology and Genetics, Lavrentyeva Avenue 10, Novosibirsk 630090, Russian Federation.ORCID 0000-0002-4905-3088
Victoria MironovaDepartment of Plant Systems Physiology, Radboud University, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands.ORCID 0000-0003-3438-0147
Enrico ScarpellaDepartment of Biological Sciences, University of Alberta, CW-405 Biological Sciences Building, Edmonton AB T6G 2E9, Canada.
Andre KuhnLaboratory of Biochemistry, Wageningen University, Stippeneng 4, 6708WE Wageningen, The Netherlands.ORCID 0000-0003-2144-8413
Dolf WeijersLaboratory of Biochemistry, Wageningen University, Stippeneng 4, 6708WE Wageningen, The Netherlands.ORCID 0000-0003-4378-141X

Funding

Human Frontier Science Program RGP0015/2022Nederlandse Organisatie voor Wetenschappelijk Onderzoek VI.VENI.212.003Russian Science Foundation 20-14-00140Wageningen University & Research
6 · The paper itself

Abstract

The auxin signaling molecule regulates a range of plant growth and developmental processes. The core transcriptional machinery responsible for auxin-mediated responses is conserved across all land plants. Genetic, physiological and molecular exploration in bryophyte and angiosperm model species have shown both qualitative and quantitative differences in auxin responses. Given the highly divergent ontogeny of the dominant gametophyte (bryophytes) and sporophyte (angiosperms) generations, however, it is unclear whether such differences derive from distinct phylogeny or ontogeny. Here, we address this question by comparing a range of physiological, developmental and molecular responses to auxin in both generations of the model fern Ceratopteris richardii. We find that auxin response in Ceratopteris gametophytes closely resembles that of a thalloid bryophyte, whereas the sporophyte mimics auxin response in flowering plants. This resemblance manifests both at the phenotypic and transcriptional levels. Furthermore, we show that disrupting auxin transport can lead to ectopic sporophyte induction on the gametophyte, suggesting a role for auxin in the alternation of generations. Our study thus identifies developmental phase, rather than phylogeny, as a major determinant of auxin response properties in land plants.

Indexed as

Gene Expression Regulation, PlantGerm Cells, PlantIndoleacetic AcidsBiological TransportFernsPhylogenyPlant Growth RegulatorsPteridaceaeSignal TransductionIndoleacetic AcidsPlant Growth RegulatorsAuxinCeratopterisEvo-devoEvolutionFernMarchantiaPlant development

Identifiers

PMID39324436
PMCPMC11449451

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.