Evidence map›Paper›PMID 39324009›Full record

ArticleFrontiers in oncology2024

Genomic alterations in the stepwise progression from normal mucosa to metastasizing oral squamous cell carcinoma.

Jakob Myllerup Jensen, Sannia Mia Svenningsen Sjöstedt, Javiera Laing Carmona, Lise Barlebo Ahlborn, Filipe Garrett Vieira, Finn Cilius Nielsen, Katalin Kiss, Christian Grønhøj, Christian von Buchwald

Abstract read
In one paragraph

Article in Frontiers in oncology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jakob Myllerup JensenDepartment of Otorhinolaryngology, Head and Neck Surgery and Audiology, Rigshospitalet, University of Copenhagen, Copenhagen, Denmark.
Sannia Mia Svenningsen SjöstedtDepartment of Otorhinolaryngology, Head and Neck Surgery and Audiology, Rigshospitalet, University of Copenhagen, Copenhagen, Denmark.
Javiera Laing CarmonaDepartment of Genomic Medicine, Rigshospitalet, University of Copenhagen, Copenhagen, Denmark.
Lise Barlebo AhlbornDepartment of Genomic Medicine, Rigshospitalet, University of Copenhagen, Copenhagen, Denmark.
Filipe Garrett VieiraDepartment of Genomic Medicine, Rigshospitalet, University of Copenhagen, Copenhagen, Denmark.
Finn Cilius NielsenDepartment of Genomic Medicine, Rigshospitalet, University of Copenhagen, Copenhagen, Denmark.
Katalin KissDepartment of Pathology, Rigshospitalet, University of Copenhagen, Copenhagen, Denmark.
Christian GrønhøjDepartment of Otorhinolaryngology, Head and Neck Surgery and Audiology, Rigshospitalet, University of Copenhagen, Copenhagen, Denmark.
Christian von BuchwaldDepartment of Otorhinolaryngology, Head and Neck Surgery and Audiology, Rigshospitalet, University of Copenhagen, Copenhagen, Denmark.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: The aim of this study was to investigate the genomic changes that occur in the development from dysplasia, cancer and to regional metastases in patients with oral cavity squamous cell carcinoma (OSCC). Material and methods: We included OSCC patients with lymph node metastases at diagnosis, treated with primary surgery at Rigshospitalet, University of Copenhagen in the period 2007-2014. The resected tumor specimens were evaluated by a pathologist, who marked areas of morphologically normal tissue and dysplasia surrounding the cancer, two areas from the cancer tissue, and one area within the lymph node metastases. From these areas a punch biopsy was taken, and DNA from each sample was extracted and sequenced using Illumina's TSO500 HT cancer panel. Results: From 51 OSCC patients, 255 samples were included, comprising a wide variety of genomic alterations. Substantial intratumor heterogeneity was found. The most commonly mutated gene was Conclusion: Substantial inter- and intratumor genomic heterogeneity was found. Mutation of

Indexed as

carcinomagenomicshead and neck cancermetastasisoral squamous cell carcinoma

Identifiers

PMID39324009
PMCPMC11422351

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.