Evidence map›Paper›PMID 39320917›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Proteomic and phosphoproteomic landscape of localized prostate cancer unveils distinct molecular subtypes and insights into precision therapeutics.

Zengming Wang, Haolan Yu, Wei Bao, Min Qu, Yan Wang, Liandong Zhang, Xubing Liu, Chen Liu, Miaoxia He, Jing Li and 9 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Zengming Wang *Department of Urology, Changhai Hospital, Second Military Medical University (Naval Medical University), Shanghai 200433, China.ORCID 0009-0000-1691-8244
Haolan Yu *Department of Urology, Changhai Hospital, Second Military Medical University (Naval Medical University), Shanghai 200433, China.ORCID 0009-0003-5054-4364
Wei Bao *Department of Urology, Changhai Hospital, Second Military Medical University (Naval Medical University), Shanghai 200433, China.
Min Qu *Department of Urology, Changhai Hospital, Second Military Medical University (Naval Medical University), Shanghai 200433, China.
Yan WangDepartment of Urology, Changhai Hospital, Second Military Medical University (Naval Medical University), Shanghai 200433, China.ORCID 0000-0001-5624-6745
Liandong ZhangKey Laboratory of Computational Biology, Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, University of Chinese Academy of Sciences, Shanghai 200031, China.
Xubing LiuKey Laboratory of Computational Biology, Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, University of Chinese Academy of Sciences, Shanghai 200031, China.
Chen LiuKey Laboratory of Computational Biology, Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, University of Chinese Academy of Sciences, Shanghai 200031, China.
Miaoxia HeDepartment of Pathology, Changhai Hospital, Second Military Medical University, Shanghai 200433, China.
Jing LiCenter for Translational Medicine, Second Military Medical University (Naval Medical University), Shanghai 200433, China.
Zhenyang DongDepartment of Urology, Changhai Hospital, Second Military Medical University (Naval Medical University), Shanghai 200433, China.
Yun ZhangDepartment of Urology, Changhai Hospital, Second Military Medical University (Naval Medical University), Shanghai 200433, China.
Bo YangDepartment of Urology, Changhai Hospital, Second Military Medical University (Naval Medical University), Shanghai 200433, China.
Jianguo HouDepartment of Urology, Changhai Hospital, Second Military Medical University (Naval Medical University), Shanghai 200433, China.
Chuanliang XuDepartment of Urology, Changhai Hospital, Second Military Medical University (Naval Medical University), Shanghai 200433, China.
Linhui WangDepartment of Urology, Changhai Hospital, Second Military Medical University (Naval Medical University), Shanghai 200433, China.
Xin LiKey Laboratory of Computational Biology, Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, University of Chinese Academy of Sciences, Shanghai 200031, China.
Xu GaoDepartment of Urology, Changhai Hospital, Second Military Medical University (Naval Medical University), Shanghai 200433, China.
Chenghua YangDepartment of Urology, Changhai Hospital, Second Military Medical University (Naval Medical University), Shanghai 200433, China.ORCID 0009-0007-8653-5389

Funding

MOST | National Natural Science Foundation of China (NSFC) 31970554MOST | National Natural Science Foundation of China (NSFC) 81772695 82373011MOST | National Natural Science Foundation of China (NSFC) 82272793
6 · The paper itself

Abstract

Building upon our previous investigation of genomic, epigenomic, and transcriptomic profiles of prostate cancer in China, we conducted a comprehensive analysis of proteomic and phosphoproteomic profiles of 82 tumor tissues and matched adjacent normal tissues from 41 Chinese patients with localized prostate cancer. We identified three distinct proteomic subtypes with significant difference in both molecular features and clinical prognosis. Notably, these proteomic subtypes exhibited a parallel degree of heterogeneity in the phosphoproteome, featuring unique metabolism, proliferation, and immune infiltration characteristics. We further demonstrated that a combination of proteins and phosphosites serves as the most effective biomarkers in prostate cancer to predict biochemical recurrence. Through an integrated multiomics analysis, we revealed mechanistic differences underlying different proteomic subtypes and highlighted the potential significance of Serine/arginine-rich splicing factor 1 (SRSF1) phosphorylation in promoting the malignant characteristics of prostate cancer cells. Our multiomics data provide valuable resources for understanding the molecular mechanisms of prostate cancer within the Chinese population, which have the potential to inform the development of personalized treatment strategies and enhance prognostic analyses for prostate cancer patients.

Indexed as

PhosphoproteinsProstatic NeoplasmsProteomicsAgedBiomarkers, TumorChinaHumansMaleMiddle AgedPhosphorylationPrecision MedicinePrognosisProteomeSerine-Arginine Splicing FactorsBiomarkers, TumorPhosphoproteinsProteomeSerine-Arginine Splicing Factorsmolecular subtypingphosphoproteomicsprecision medicineprostate cancerproteomics

Identifiers

PMID39320917
PMCPMC11459144

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.