Evidence map›Paper›PMID 39320489›Full record

ArticleApplied microbiology and biotechnology2024

Enhancing the imidase activity of BpIH toward 3-isobutyl glutarimide via semi-rational design.

Wenping Qin, Long Xu, Kun Cheng, Yinhua Lu, Zhongyi Yang

Abstract read
In one paragraph

Article in Applied microbiology and biotechnology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Wenping QinSchool of Pharmaceutical Sciences, Taizhou University, 1139 Shifu Rd, Taizhou, 318000, China.
Long XuTaizhou Dachen Pharmaceutical Co., Ltd, 17 Fifth Avenue, Linhai Zone, Zhejiang National Chemical & Pharmaceutical Base, Taizhou, 317016, China.
Kun ChengSchool of Pharmaceutical Sciences, Taizhou University, 1139 Shifu Rd, Taizhou, 318000, China.
Yinhua LuCollege of Life Sciences, Shanghai Normal University, 100 Guilin Rd, Shanghai, 200233, China. yhlu@shnu.edu.cn.
Zhongyi YangSchool of Pharmaceutical Sciences, Taizhou University, 1139 Shifu Rd, Taizhou, 318000, China. yangzhyi@126.com.ORCID http://orcid.org/0000-0001-9669-207X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

(R)-3-Isobutylglutarate monoamide (R-IBM) is a key intermediate in the synthesis of the analgesic drug pregabalin. Recently, the imidase BpIH derived from Burkholderia phytofirmans was identified as a promising catalyst for the industrial production of R-IBM. Notably, this catalyst has the distinct advantage of achieving a 100% theoretical yield from 3-isobutyl glutarimide (IBI). In this study, homology modeling and structure alignment techniques were used to determine the substrate binding pocket of BpIH. Semi-rational design was used to analyze the amino acid residue conservation in the binding pocket region of BpIH. Interestingly, mutations of several low-conserved amino acid located 6-9 Å from the substrate significantly enhanced the catalytic activity of BpIH. Among them, the triple mutant Y37FH133NS226I (YHS-I) showed approximately a fivefold increase in enzyme activity and a significantly improved catalytic efficiency (k

Indexed as

BurkholderiaAmidohydrolasesBinding SitesGlutaratesKineticsModels, MolecularSubstrate SpecificityAmidohydrolasesdihydropyrimidinaseGlutaratesDirected evolutionImidasePregabalinR-3-Isobutylglutarate monoamide (R-IBM)Semi rational design

Identifiers

PMID39320489
PMCPMC11424739

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.