Evidence map›Paper›PMID 39319536›Full record

ArticleeLife2024

Arp2/3 complex activity enables nuclear YAP for naïve pluripotency of human embryonic stem cells.

Nathaniel Paul Meyer, Tania Singh, Matthew L Kutys, Todd G Nystul, Diane L Barber

Abstract read
In one paragraph

Article in eLife, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Don't be so naïve.eLife · 2024
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Nathaniel Paul MeyerDepartment of Cell & Tissue Biology, University of California, San Francisco, San Francisco, United States.ORCID https://orcid.org/0000-0002-8327-8563
Tania SinghDepartment of Cell & Tissue Biology, University of California, San Francisco, San Francisco, United States.ORCID https://orcid.org/0000-0003-0692-4821
Matthew L KutysDepartment of Cell & Tissue Biology, University of California, San Francisco, San Francisco, United States.ORCID https://orcid.org/0000-0002-0752-649X
Todd G NystulDepartments of Anatomy and OB-GYN/RS, University of California, San Francisco, San Francisco, United States.ORCID https://orcid.org/0000-0002-6250-2394
Diane L BarberDepartment of Cell & Tissue Biology, University of California, San Francisco, San Francisco, United States.ORCID https://orcid.org/0000-0001-7185-9435

Funding

Project 4: Human Endometrial Programming for Successful ImplantationP50HD055764 · NICHD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI GIUDICE, LINDA C · 2014 to 2022
$16.4M
Trophoblast Differentiation in In Vivo and In Vitro Fertilized EmbryosU54HD055764 · NICHD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI GIUDICE, LINDA C · 2007 to 2013
$11.5M
PREDOCTORAL TRAINING IN DEVELOPMENTAL BIOLOGYT32HD007470 · NICHD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Todd Nystul · 1994 to 2026
$7.7M
Cell Fate Decisions in Epithelial Stem Cell LineagesR35GM136348 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Todd Nystul · 2020 to 2026
$3.9M
Decoding cortical Notch signaling and morphogenic instruction at cell-cell interfacesR35GM150987 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KUTYS, MATTHEW L · 2023 to 2025
$1.3M
Wide-field super-resolution spinning disk confocal microscopeS10OD028611 · OD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI WITTMANN, TORSTEN · 2020 to 2020
$600k
INHIBITION OF RIBONUCLEOTIDE REDUCTASE IN GLIOMASF32CA099384 · NCI · VIRGINIA COMMONWEALTH UNIVERSITY · PI DOS SANTOS, WAGNER G · 2003 to 2005
$164k
Shear stress-mediated Notch1 activation by intrinsic cell adhesive and cytoskeletal activityF31HL162520 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SINGH, TANIA · 2022 to 2024
$119k
Eunice Kennedy Shriver National Institute of Child Health and Human Development HD055764National Science Foundation 1933240NCI NIH HHS 9938488NHLBI NIH HHS F31 HL162520NHLBI NIH HHS F31HL162520NICHD NIH HHS P50 HD055764NICHD NIH HHS T32 HD007470NICHD NIH HHS U54 HD055764NIGMS NIH HHS GM136348NIGMS NIH HHS R35 GM136348NIGMS NIH HHS R35 GM150987NIH HHS S10 OD028611
6 · The paper itself

Abstract

Our understanding of the transitions of human embryonic stem cells (hESCs) between distinct stages of pluripotency relies predominantly on regulation by transcriptional and epigenetic programs with limited insight on the role of established morphological changes. We report remodeling of the actin cytoskeleton of hESCs as they transition from primed to naïve pluripotency which includes assembly of a ring of contractile actin filaments encapsulating colonies of naïve hESCs. Activity of the Arp2/3 complex is required for formation of the actin ring, to establish uniform cell mechanics within naïve colonies, to promote nuclear translocation of the Hippo pathway effectors YAP and TAZ, and for effective transition to naïve pluripotency. RNA-sequencing analysis confirms that Arp2/3 complex activity regulates Hippo signaling in hESCs, and impaired naïve pluripotency with inhibited Arp2/3 complex activity is rescued by expressing a constitutively active, nuclear-localized YAP-S127A. Moreover, expression of YAP-S127A partially restores the actin filament fence with Arp2/3 complex inhibition, suggesting that actin filament remodeling is both upstream and downstream of YAP activity. These new findings on the cell biology of hESCs reveal a mechanism for cytoskeletal dynamics coordinating cell mechanics to regulate gene expression and facilitate transitions between pluripotency states.

Indexed as

Actin-Related Protein 2-3 ComplexHuman Embryonic Stem CellsTranscription FactorsYAP-Signaling ProteinsActin CytoskeletonAdaptor Proteins, Signal TransducingCell NucleusHumansPluripotent Stem CellsSignal TransductionActin-Related Protein 2-3 ComplexAdaptor Proteins, Signal TransducingTranscription FactorsYAP1 protein, humanYAP-Signaling Proteinsactincell biologycytoskeletonhippo signalinghumanhuman embryonic stem cellsnaive pluripotencyregenerative medicinestem cellsYAP

Identifiers

PMID39319536
PMCPMC11509671

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.