Evidence map›Paper›PMID 39318156›Full record

ArticleGenome biology and evolution2024

Evolution of Apoptotic Signaling Pathways Within Lophotrochozoans.

Helen R Horkan, Nikolay Popgeorgiev, Michel Vervoort, Eve Gazave, Gabriel Krasovec

Abstract read
In one paragraph

Article in Genome biology and evolution, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Helen R HorkanCentre for Chromosome Biology, School of Biological and Chemical Sciences, University of Galway, Galway, Ireland.ORCID 0000-0002-4489-2990
Nikolay PopgeorgievCentre de Recherche en Cancérologie de Lyon, U1052 INSERM, UMR CNRS 5286, Centre Léon Bérard, Université Claude Bernard Lyon 1, Lyon, France.ORCID 0000-0002-4835-5201
Michel VervoortUniversité Paris Cité, CNRS, Institut Jacques Monod, F-75013 Paris, France.ORCID 0000-0002-5995-2140
Eve GazaveUniversité Paris Cité, CNRS, Institut Jacques Monod, F-75013 Paris, France.ORCID 0000-0002-4647-6640
Gabriel KrasovecCentre for Chromosome Biology, School of Biological and Chemical Sciences, University of Galway, Galway, Ireland.ORCID 0000-0001-8848-2208

Funding

Association pour la Recherche sur le Cancer PJA 20191209482comité départemental de Paris de la Ligue Nationale Contre le Cancer RS20/75-20Fondation ARC pour la recherche sur le cancer ARCPOST-DOC2022070005318Institut Universitaire de FranceIrish Research Council postdoctoral fellow GOIPD/2020/149Science Foundation Ireland Centre for Research Training in Genomic Data Science 18/CRT/6214
6 · The paper itself

Abstract

Apoptosis is the main form of regulated cell death in metazoans. Apoptotic pathways are well characterized in nematodes, flies, and mammals, leading to a vision of the conservation of apoptotic pathways in metazoans. However, we recently showed that intrinsic apoptosis is in fact divergent among metazoans. In addition, extrinsic apoptosis is poorly studied in non-mammalian animals, making its evolution unclear. Consequently, our understanding of apoptotic signaling pathways evolution is a black box which must be illuminated by extending research to new biological systems. Lophotrochozoans are a major clade of metazoans which, despite their considerable biological diversity and key phylogenetic position as sister group of ecdysozoans (i.e. flies and nematodes), are poorly explored, especially regarding apoptosis mechanisms. Traditionally, each apoptotic signaling pathway was considered to rely on a specific initiator caspase, associated with an activator. To shed light on apoptosis evolution in animals, we explored the evolutionary history of initiator caspases, caspase activators, and the BCL-2 family (which control mitochondrial apoptotic pathway) in lophotrochozoans using phylogenetic analysis and protein interaction predictions. We discovered a diversification of initiator caspases in molluscs, annelids, and brachiopods, and the loss of key extrinsic apoptosis components in platyhelminths, along with the emergence of a clade-specific caspase with an ankyrin pro-domain. Taken together, our data show a specific history of apoptotic actors' evolution in lophotrochozoans, further demonstrating the appearance of distinct apoptotic signaling pathways during metazoan evolution.

Indexed as

ApoptosisCaspasesEvolution, MolecularPhylogenySignal TransductionAnimalsProto-Oncogene Proteins c-bcl-2CaspasesProto-Oncogene Proteins c-bcl-2apoptosisBCL-2 familycaspasesevolutionlophotrochozoansphylogeny

Identifiers

PMID39318156
PMCPMC11463336

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.