Evidence map›Paper›PMID 39317670›Full record

ArticleFEMS microbiology ecology2024

The role of family and environment in determining the skin bacterial communities of captive aquatic frogs, Xenopus laevis.

Phoebe A Chapman, Daniel Hudson, Xochitl C Morgan, Caroline W Beck

Abstract read
In one paragraph

Article in FEMS microbiology ecology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Commensal skin bacteria interact with the innate immune system to promote tail regeneration in Xenopus laevis tadpoles.Developmental dynamics : an official publication of the American Association of Anatomists · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Phoebe A ChapmanDepartment of Zoology, University of Otago, Dunedin, 9016, New Zealand.ORCID 0000-0002-3303-9134
Daniel HudsonDepartment of Zoology, University of Otago, Dunedin, 9016, New Zealand.
Xochitl C MorganDepartment of Microbiology and Immunology, University of Otago, Dunedin, 9016, New Zealand.
Caroline W BeckDepartment of Zoology, University of Otago, Dunedin, 9016, New Zealand.

Funding

Royal Society of New Zealand Marsden Fund MFP-UOO1910
6 · The paper itself

Abstract

Skin microbes play an important role in amphibian tissue regeneration. Xenopus spp. (African clawed frogs) are well-established model organisms, and standard husbandry protocols, including use of antibiotics, may affect experimental outcomes by altering bacterial assemblages. It is therefore essential to improve knowledge of Xenopus bacterial community characteristics and inheritance. We undertook bacterial 16S rRNA gene sequencing and source tracking of a captive Xenopus laevis colony, including various life stages and environmental samples across multiple aquarium systems. Tank environments supported the most complex bacterial communities, while egg jelly bacteria were the most diverse of frog life stages; tadpole bacterial communities were relatively simple. Rhizobium (Proteobacteria) and Chryseobacterium (Bacteroidota) were dominant in tadpoles, whereas Chryseobacterium, Vogesella (Proteobacteria), and Acinetobacter (Proteobacteria) were common in females. Tadpoles received approximately two-thirds of their bacteria via vertical transmission, though 23 genera were differentially abundant between females and tadpoles. Female frog skin appears to select for specific taxa, and while tadpoles inherit a proportion of their skin bacteria from females via the egg, they support a distinct and less diverse community. The outcomes of this study suggest the impacts of breaking the bacterial transmission chain with antibiotic treatment should be considered when raising tadpoles for experimental purposes.

Indexed as

BacteriaLarvaMicrobiotaRNA, Ribosomal, 16SSkinXenopus laevisAnimalsDNA, BacterialFemaleMaleDNA, BacterialRNA, Ribosomal, 16S16S rRNAamphibiansbacterial colonizationbacterial microbiomevertical transmissionXenopus laevis

Identifiers

PMID39317670
PMCPMC11503959

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.