Evidence map›Paper›PMID 39316702›Full record

ArticlePlant physiology2024

Transcription factor VRT2 reinitiates vernalization when interrupted by warm temperatures in a temperate grass model.

Alice Kennedy, Meixia Li, Anja Vandeperre, Muhammad Usama Hameed, Michelle Van Dyck, Sarah Engelen, Jill C Preston, Koen Geuten

Abstract read
In one paragraph

Article in Plant physiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
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  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Alice KennedyDepartment of Biology, Leuven Plant Institute, KU Leuven, 3000 Leuven, Belgium.ORCID 0000-0002-8746-4400
Meixia LiDepartment of Biology, Leuven Plant Institute, KU Leuven, 3000 Leuven, Belgium.
Anja VandeperreDepartment of Biology, Leuven Plant Institute, KU Leuven, 3000 Leuven, Belgium.ORCID 0000-0002-9580-2553
Muhammad Usama HameedDepartment of Biology, Leuven Plant Institute, KU Leuven, 3000 Leuven, Belgium.ORCID 0000-0002-1943-4381
Michelle Van DyckDepartment of Biology, Leuven Plant Institute, KU Leuven, 3000 Leuven, Belgium.ORCID 0009-0000-6722-017X
Sarah EngelenDepartment of Biology, Leuven Plant Institute, KU Leuven, 3000 Leuven, Belgium.
Jill C PrestonDepartment of Plant Biology, College of Agriculture and Life Sciences, University of Vermont, Burlington, VT 05405, USA.ORCID 0000-0002-9211-5061
Koen GeutenDepartment of Biology, Leuven Plant Institute, KU Leuven, 3000 Leuven, Belgium.ORCID 0000-0002-9692-4499

Funding

Vermont INBRE Administrative Supplement 2024 AWD 118P20GM103449 · NIGMS · UNIVERSITY OF VERMONT & ST AGRIC COLLEGE · PI CHRISTOPHER S FRANCKLYN · 2012 to 2026
$58.4M
KU Leuven BOF C24/17/037National Institute of Health P20GM103449National Science Foundation IOS2120732NIGMS NIH HHS P20 GM103449
6 · The paper itself

Abstract

Vernalization-responsive plants use cold weather, or low temperature, as a cue to monitoring the passing of winter. Winter cereals can remember the extent of coldness they have experienced, even when winter is punctuated by warm days. However, in a seemingly unnatural process called "devernalization," hot temperatures can erase winter memory. Previous studies in bread wheat (Triticum aestivum) have implicated the MADS-box transcription factor VEGETATIVE TO REPRODUCTIVE TRANSITION 2 (VRT2) in vernalization based on transcriptional behavior and ectopic expression. Here, we characterized 3 BdVRT2 loss-of-function alleles in the temperate model grass Brachypodium distachyon. In addition to extended vernalization requirements, mutants showed delayed flowering relative to wild-type plants when exposed only briefly to warm temperatures after partial vernalization, with flowering being unaffected when vernalization was saturating. Together, these data suggest a role for BdVRT2 in both vernalization and in its reinitiation when interrupted by warm temperatures. In controlled constant conditions, BdVRT2 transcription was not strongly affected by vernalization or devernalization. Yet, by monitoring BdVRT2 expression in seasonally varying and fluctuating conditions in an unheated greenhouse, we observed strong upregulation, suggesting that its transcription is regulated by fluctuating vernalizing-devernalizing conditions. Our data suggest that devernalization by hot temperatures is not a peculiarity of domesticated cereal crops but is the extreme of the reversibility of vernalization by warm temperatures and has broader biological relevance across temperate grasses.

Indexed as

BrachypodiumFlowersGene Expression Regulation, PlantPlant ProteinsTranscription FactorsCold TemperatureHot TemperatureSeasonsVernalizationPlant ProteinsTranscription Factors

Identifiers

PMID39316702
PMCPMC11638104

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.