Evidence map›Paper›PMID 39316279›Full record

ArticleDrugs in R&D2024

Trametinib Sensitivity is Defined by a Myeloid Differentiation Profile in Acute Myeloid Leukemia.

Mathieu Quesnel-Vallières, David C Schultz, Alena Orlenko, Yancy Lo, Jason Moore, Marylyn Ritchie, David Roth, Martin Carroll, Yoseph Barash, Kristen W Lynch and 1 more

Abstract read
In one paragraph

Article in Drugs in R&D, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Mathieu Quesnel-VallièresDepartment of Biochemistry and Biophysics, University of Pennsylvania, Philadelphia, PA, 19104, USA.
David C SchultzDepartment of Biochemistry and Biophysics, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Alena OrlenkoDepartment of Pathology and Laboratory Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Yancy LoDepartment of Biochemistry and Biophysics, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Jason MooreInstitute for Biomedical Informatics, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Marylyn RitchieDepartment of Genetics, University of Pennsylvania, Philadelphia, PA, 19104, USA.
David RothDepartment of Pathology and Laboratory Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Martin CarrollDepartment of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Yoseph BarashDepartment of Genetics, University of Pennsylvania, Philadelphia, PA, 19104, USA. yosephb@seas.upenn.edu.
Kristen W LynchDepartment of Biochemistry and Biophysics, University of Pennsylvania, Philadelphia, PA, 19104, USA. klync@pennmedicine.upenn.edu.ORCID http://orcid.org/0000-0002-0120-8079
Sara CherryDepartment of Pathology and Laboratory Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA. cherrys@pennmedicine.upenn.edu.

Funding

Signal-Induced Regulation of Alternative RNA ProcessingR35GM118048 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI KRISTEN W LYNCH · 2016 to 2026
$6.6M
Cassette exons in neoplastic pro-B-cells: implications for immunotherapyU01CA232563 · NCI · CHILDREN'S HOSP OF PHILADELPHIA · PI BARASH, YOSEPH, THOMAS-TIKHONENKO, ANDREI · 2018 to 2022
$3.5M
Pathologic Signaling Pathways in AML CellsI01BX004662 · VA · PHILADELPHIA VA MEDICAL CENTER · PI CARROLL, MARTIN · 2021 to 2024
–
BLRD VA I01 BX004662NCI NIH HHS U01 CA232563NIGMS NIH HHS R35 GM118048U.S. Department of Veterans Affairs I01BX004662
6 · The paper itself

Abstract

BACKGROUND AND

objectiveAcute myelogenous leukemia (AML) is a common blood cancer marked by heterogeneity in disease and diverse genetic abnormalities. Additional therapies are needed as the 5-year survival remains below 30%. Trametinib is a mitogen-activated extracellular signal-regulated kinase (MEK) inhibitor that is widely used in solid tumors and also in tumors with activating RAS mutations. A subset of patients with AML carry activating RAS mutations; however, a small-scale clinical trial with trametinib showed little efficacy. Here, we sought to identify transcriptomic determinants of trametinib sensitivity in AML.

methodsWe tested the activity of trametinib against a panel of tumor cells from patients with AML ex vivo and compared this with RNA sequencing (RNA-Seq) data from untreated blasts from the same patient samples. We then used a correlation analysis between gene expression and trametinib sensitivity to identify potential biomarkers predictive of drug response.

resultsWe found that a subset of AML tumor cells were sensitive to trametinib ex vivo, only a fraction of which (3/10) carried RAS mutations. On the basis of our RNA-Seq analysis we found that markers of trametinib sensitivity are associated with a myeloid differentiation profile that includes high expression of CD14 and CLEC7A (Dectin-1), similar to the gene expression profile of monocytes. Further characterization confirmed that trametinib-sensitive samples display features of monocytic differentiation with high CD14 surface expression and were enriched for the M4 subtypes of the FAB classification.

conclusionsOur study identifies additional molecular markers that can be used with molecular features including RAS status to identify patients with AML that may benefit from trametinib treatment.

Indexed as

Cell DifferentiationLeukemia, Myeloid, AcutePyridonesPyrimidinonesAntineoplastic AgentsFemaleHumansMaleMiddle AgedMutationProtein Kinase InhibitorsTranscriptomeAntineoplastic AgentsProtein Kinase InhibitorsPyridonesPyrimidinonestrametinib

Identifiers

PMID39316279
PMCPMC11456044

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.