Evidence map›Paper›PMID 39315956›Full record

ArticleEndocrine-related cancer2024

Impact of age on genomic alterations and the tumor immune microenvironment in papillary thyroid cancer.

Dominique D Liddy, Zhongyue Zhang, Kalyanee Shirlekar, Zhongping He, Kelly M Herremans, Song Han, Jason O Brant, Francis D Moore, Steven J Hughes, Aditya S Shirali

Abstract read
In one paragraph

Article in Endocrine-related cancer, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Microenvironment-based immunotherapy in oral cancer: a comprehensive review.Medical oncology (Northwood, London, England) · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Dominique D LiddyDepartment of Surgery, University of Florida College of Medicine, Gainesville, Florida, USA.
Zhongyue ZhangUniversity of Florida Health Cancer Center, Gainesville, Florida, USA.
Kalyanee ShirlekarUniversity of Florida Health Cancer Center, Gainesville, Florida, USA.
Zhongping HeUniversity of Florida Health Cancer Center, Gainesville, Florida, USA.
Kelly M HerremansDepartment of Surgery, University of Florida College of Medicine, Gainesville, Florida, USA.
Song HanDepartment of Surgery, University of Florida College of Medicine, Gainesville, Florida, USA.
Jason O BrantUniversity of Florida Health Cancer Center, Gainesville, Florida, USA.
Francis D MooreDepartment of Surgery, University of Florida College of Medicine, Gainesville, Florida, USA.
Steven J HughesDepartment of Surgery, University of Florida College of Medicine, Gainesville, Florida, USA.
Aditya S ShiraliDepartment of Surgery, University of Florida College of Medicine, Gainesville, Florida, USA.ORCID 0000-0002-8132-3391

Funding

University of Florida Health Cancer Center Support GrantP30CA247796 · NCI · UNIVERSITY OF FLORIDA · PI Alison Ivey · 2023 to 2026
$10.9M
NCI NIH HHS P30 CA247796
6 · The paper itself

Abstract

Differentiated thyroid cancer in older adults has been linked to alterations in the mutational landscape and tumor immune cell infiltration that create a tumor-permissive microenvironment. We sought to determine the impact of age on genomic alterations and immune cell composition in papillary thyroid cancer (PTC). Genomic alterations, immune cell composition, and clinical data were obtained using The Cancer Genome Atlas and computational immunogenomic analyses. Disease severity was recoded into three groups: Group A (T1-2N0M0), Group B (T1-3N1a-1bM0), and Group C (T4NxMx or TxNxM1). Histopathologic subtypes included conventional, follicular-variant, and tall cell variant PTC. Spearman's rank correlation, ANOVA, t-test, and multivariable linear regression were performed. A total of 470 PTC samples were retrieved from the TCGA portal with genomic alteration and immune cell composition data. TERT promoter alterations were more common in patients aged ≥65 years (26% vs 4%, P < 0.0001). Tumor mutational burden increased with increasing age (r = 0.463, P < 0.0001). Increasing age was associated with decreased CD8+ T cells (r = -0.15, P = 0.01) using CIBERSORT and decreased B cells (r = -0.13), CD8+ T cells (r = -0.19), and neutrophils (r = -0.14, P < 0.05) using TIMER. Multivariate regression found that increasing age was independently associated with increased resting NK cells and resting dendritic cells, and decreased naïve B cells and CD8+ T cells (P < 0.05). PTC tumors of older adults are characterized by increased TERT promoter alterations, increased tumor mutational burden, and a decreased cytotoxic CD8+ T cells and increased resting dendritic cell immune infiltrate. Further studies are needed to determine if these changes in immune cell infiltrate are associated with compromised outcomes.

Indexed as

Thyroid Cancer, PapillaryThyroid NeoplasmsTumor MicroenvironmentAdultAgedAged, 80 and overAge FactorsFemaleGenomicsHumansMaleMiddle AgedMutationcomputational analysisgenomic alterationsimmune cell infiltratepapillary thyroid carcinomatumor immune microenvironment

Identifiers

PMID39315956
PMCPMC11608430

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.