Evidence map›Paper›PMID 39314416›Full record

ArticlebioRxiv : the preprint server for biology2024

Longitudinal Multi-omic Immune Profiling Reveals Age-Related Immune Cell Dynamics in Healthy Adults.

Qiuyu Gong, Mehul Sharma, Emma L Kuan, Marla C Glass, Aishwarya Chander, Mansi Singh, Lucas T Graybuck, Zachary J Thomson, Christian M LaFrance, Samir Rachid Zaim and 43 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

53 authors.

Qiuyu GongAllen Institute for Immunology, Seattle, WA, USA.ORCID 0009-0006-3885-0862
Mehul SharmaAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0002-9591-0415
Emma L KuanAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0002-5824-2016
Marla C GlassAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0003-3763-0842
Aishwarya ChanderAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0002-0459-7583
Mansi SinghAllen Institute for Immunology, Seattle, WA, USA.ORCID 0009-0004-7045-1410
Lucas T GraybuckAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0002-8814-6818
Zachary J ThomsonAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0002-3861-9998
Christian M LaFranceAllen Institute for Immunology, Seattle, WA, USA.ORCID 0009-0006-0763-2002
Samir Rachid ZaimAllen Institute for Immunology, Seattle, WA, USA.ORCID 0009-0007-9256-2324
Tao PengAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0003-0550-9183
Lauren Y OkadaAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0002-5691-3373
Palak C GengeAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0002-0851-6445
Katherine E HendersonAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0001-8682-5051
Elisabeth M DornischAllen Institute for Immunology, Seattle, WA, USA.ORCID 0009-0009-6969-8690
Erik D LaytonAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0001-6409-290X
Peter J WittigAllen Institute for Immunology, Seattle, WA, USA.ORCID 0009-0000-9639-5518
Alexander T HeubeckAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0002-9312-4090
Nelson M MukukaAllen Institute for Immunology, Seattle, WA, USA.ORCID 0009-0005-9579-8389
Julian ReadingAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0002-8533-3992
Charles R RollAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0002-0726-2076
Veronica HernandezAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0003-2568-2565
Vaishnavi ParthasarathyAllen Institute for Immunology, Seattle, WA, USA.ORCID 0009-0007-0090-5861
Tyanna J StuckeyAllen Institute for Immunology, Seattle, WA, USA.ORCID 0009-0003-3262-8441
Blessing MusgroveAllen Institute for Immunology, Seattle, WA, USA.ORCID 0009-0000-0640-723X
Elliott SwansonAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0002-0351-6446
Cara LordAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0002-7827-2159
Morgan D A WeissAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0002-4189-1992
Cole G PhalenAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0002-0196-2805
Regina R MetteyAllen Institute for Immunology, Seattle, WA, USA.
Kevin J LeeAllen Institute for Immunology, Seattle, WA, USA.ORCID 0009-0001-9539-764X
John B JohannesonAllen Institute for Immunology, Seattle, WA, USA.ORCID 0009-0002-7612-1290
Erin K KaweloAllen Institute for Immunology, Seattle, WA, USA.ORCID 0009-0004-0329-9914
Jessica GarberAllen Institute for Immunology, Seattle, WA, USA.ORCID 0009-0007-8773-9754
Upaasana KrishnanAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0001-8589-7061
Megan SmithmyerCenter for Interventional Immunology, Benaroya Research Institute at Virginia Mason, Seattle, WA USA.ORCID 0000-0002-1005-0621
E John WherryDepartment of Pharmacology and Translational Therapeutics, University of Pennsylvania School of Medicine, Philadelphia, PA, USA.ORCID 0000-0003-0477-1956
Laura VellaInstitute for Immunology and Immune Health, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA, USA.ORCID 0000-0002-8917-4845
Sarah E HenricksonInstitute for Immunology and Immune Health, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA, USA.ORCID 0000-0001-5569-4132
Mackenzie S KoppAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0002-7436-5622
Adam K SavageAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0003-1913-5485
Lynne A BeckerAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0003-1541-4655
Paul MeijerAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0001-5535-0399
Ernest M CoffeyAllen Institute for Immunology, Seattle, WA, USA.ORCID 0009-0001-4596-0246
Jorg J GoronzyDivision of Immunology and Rheumatology, Department of Medicine, Stanford University School of Medicine, Stanford, CA, USA.ORCID 0000-0001-7670-1856
Cate SpeakeCenter for Interventional Immunology, Benaroya Research Institute at Virginia Mason, Seattle, WA USA.ORCID 0000-0003-1480-4272
Thomas F BumolAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0003-4319-1006
Ananda W GoldrathAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0002-5900-508X
Troy R TorgersonAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0003-3489-5036
Xiao-Jun LiAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0003-0832-9479
Peter J SkeneAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0001-8965-5326
Jane H BucknerCenter for Translational Immunology, Benaroya Research Institute at Virginia Mason, Seattle, WA USA.ORCID 0000-0002-9005-1885
Claire E GustafsonAllen Institute for Immunology, Seattle, WA, USA.ORCID 0000-0002-1437-6709

Funding

Dysregulation of Naïve T cell Quiescence during AgingK01AG068373 · NIA · STANFORD UNIVERSITY · PI GUSTAFSON, CLAIRE · 2020 to 2024
$631k
NIA NIH HHS K01 AG068373
6 · The paper itself

Abstract

The generation and maintenance of protective immunity is a dynamic interplay between host and environment that is impacted by age. Understanding fundamental changes in the healthy immune system that occur over a lifespan is critical in developing interventions for age-related susceptibility to infections and diseases. Here, we use multi-omic profiling (scRNA-seq, proteomics, flow cytometry) to examined human peripheral immunity in over 300 healthy adults, with 96 young and older adults followed over two years with yearly vaccination. The resulting resource includes scRNA-seq datasets of >16 million PBMCs, interrogating 71 immune cell subsets from our new Immune Health Atlas. This study allows unique insights into the composition and transcriptional state of immune cells at homeostasis, with vaccine perturbation, and across age. We find that T cells specifically accumulate age-related transcriptional changes more than other immune cells, independent from inflammation and chronic perturbation. Moreover, impaired memory B cell responses to vaccination are linked to a Th2-like state shift in older adults' memory CD4 T cells, revealing possible mechanisms of immune dysregulation during healthy human aging. This extensive resource is provided with a suite of exploration tools at https://apps.allenimmunology.org/aifi/insights/dynamics-imm-health-age/ to enhance data accessibility and further the understanding of immune health across age.

Identifiers

PMID39314416
PMCPMC11419011

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.