Evidence map›Paper›PMID 39314414›Full record

ArticlebioRxiv : the preprint server for biology2024

Ethograms reveal a fear conditioned visual cue to organize diverse behaviors.

David C Williams, Amanda Chu, Nicholas T Gordon, Aleah M DuBois, Suhui Qian, Genevieve Valvo, Selena Shen, Jacob B Boyce, Anaise C Fitzpatrick, Mahsa Moaddab and 3 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors.

David C WilliamsBoston College, Department of Psychology & Neuroscience, 140 Commonwealth Ave., Chestnut Hill, MA 02467.
Amanda ChuBoston College, Department of Psychology & Neuroscience, 140 Commonwealth Ave., Chestnut Hill, MA 02467.
Nicholas T GordonBoston College, Department of Psychology & Neuroscience, 140 Commonwealth Ave., Chestnut Hill, MA 02467.
Aleah M DuBoisBoston College, Department of Psychology & Neuroscience, 140 Commonwealth Ave., Chestnut Hill, MA 02467.
Suhui QianBoston College, Department of Psychology & Neuroscience, 140 Commonwealth Ave., Chestnut Hill, MA 02467.
Genevieve ValvoBoston College, Department of Psychology & Neuroscience, 140 Commonwealth Ave., Chestnut Hill, MA 02467.
Selena ShenBoston College, Department of Psychology & Neuroscience, 140 Commonwealth Ave., Chestnut Hill, MA 02467.
Jacob B BoyceBoston College, Department of Psychology & Neuroscience, 140 Commonwealth Ave., Chestnut Hill, MA 02467.
Anaise C FitzpatrickBoston College, Department of Psychology & Neuroscience, 140 Commonwealth Ave., Chestnut Hill, MA 02467.
Mahsa MoaddabBoston College, Department of Psychology & Neuroscience, 140 Commonwealth Ave., Chestnut Hill, MA 02467.
Emma L RussellBoston College, Department of Psychology & Neuroscience, 140 Commonwealth Ave., Chestnut Hill, MA 02467.
Liliuokalani CounsmanBoston College, Department of Psychology & Neuroscience, 140 Commonwealth Ave., Chestnut Hill, MA 02467.
Michael A McDannaldBoston College, Department of Psychology & Neuroscience, 140 Commonwealth Ave., Chestnut Hill, MA 02467.ORCID 0000-0001-8525-1260

Funding

Early life stress, neuron-type function and a raphe-amygdala circuit for threat estimationR01MH117791 · NIMH · BOSTON COLLEGE · PI MCDANNALD, MICHAEL A · 2018 to 2025
$4.0M
NIMH NIH HHS R01 MH117791
6 · The paper itself

Abstract

Recognizing and responding to threat cues is essential to survival. In rats, freezing is the most common behavior measured. Previously we demonstrated a threat cue can organize diverse behaviors (Chu et al., 2024). However, the experimental design of Chu et al. (2024) was complex and the findings descriptive. Here, we gave female and male Long Evans rats simple paired or unpaired presentations of a light and foot shock (8 total) in a conditioned suppression setting, using a range of shock intensities (0.15, 0.25, 0.35 or 0.5 mA). We found that conditioned suppression was only observed at higher foot shock intensities (0.35 mA and 0.5 mA). We constructed comprehensive, temporal ethograms by scoring 22,272 frames of behavior for 12 mutually exclusive behavior categories in 200 ms intervals around cue presentation. A 0.5 mA and 0.35 mA shock-paired visual cue suppressed reward seeking, rearing and scaling, as well as light-directed rearing and light-directed scaling. The shock-paired visual paired cue further elicited locomotion and freezing. Linear discriminant analyses showed that ethogram data could accurately classify rats into paired and unpaired groups. Considering the complete ethogram data produced superior classification than considering subsets of behaviors. The results demonstrate diverse threat-elicited behaviors - in a simple Pavlovian fear conditioning design - containing sufficient information to distinguish the fear learning status of individual rats.

Identifiers

PMID39314414
PMCPMC11419114

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.