Evidence map›Paper›PMID 39312580›Full record

ArticlePLoS genetics2024

PNLDC1 catalysis and postnatal germline function are required for piRNA trimming, LINE1 silencing, and spermatogenesis in mice.

Chao Wei, Xiaoyuan Yan, Jeffrey M Mann, Ruirong Geng, Qianyi Wang, Huirong Xie, Elena Y Demireva, Liangliang Sun, Deqiang Ding, Chen Chen

Abstract read
In one paragraph

Article in PLoS genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
  2. Spatiotemporal control of PIWI compartmentalization by mitochondrial scaffolds defines pachytene piRNA pathway organization.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Review
  4. Article
  5. Frontiers in microbiology · 2026
    Article
  6. Article
  7. Review
  8. Review
  9. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Chao WeiDepartment of Animal Science, Michigan State University, East Lansing, Michigan, United States of America.
Xiaoyuan YanDepartment of Animal Science, Michigan State University, East Lansing, Michigan, United States of America.
Jeffrey M MannDepartment of Animal Science, Michigan State University, East Lansing, Michigan, United States of America.
Ruirong GengShanghai Key Laboratory of Maternal and Fetal Medicine, Clinical and Translational Research Center, Shanghai First Maternity and Infant Hospital, Frontier Science Center for Stem Cell Research, School of Life Sciences and Technology, Tongji University, Shanghai, China.
Qianyi WangDepartment of Chemistry, Michigan State University, East Lansing, Michigan, United States of America.ORCID https://orcid.org/0009-0002-4405-7888
Huirong XieTransgenic and Genome Editing Facility, Institute for Quantitative Health Science & Engineering, Michigan State University, East Lansing, Michigan, United States of America.
Elena Y DemirevaTransgenic and Genome Editing Facility, Institute for Quantitative Health Science & Engineering, Michigan State University, East Lansing, Michigan, United States of America.ORCID https://orcid.org/0000-0002-4708-5836
Liangliang SunDepartment of Chemistry, Michigan State University, East Lansing, Michigan, United States of America.
Deqiang DingShanghai Key Laboratory of Maternal and Fetal Medicine, Clinical and Translational Research Center, Shanghai First Maternity and Infant Hospital, Frontier Science Center for Stem Cell Research, School of Life Sciences and Technology, Tongji University, Shanghai, China.ORCID https://orcid.org/0000-0002-7959-5654
Chen ChenDepartment of Animal Science, Michigan State University, East Lansing, Michigan, United States of America.ORCID https://orcid.org/0000-0001-9159-4489

Funding

Tudor Domain Proteins in Germline Genome DefenseR01HD084494 · NICHD · MICHIGAN STATE UNIVERSITY · PI CHEN, CHEN · 2015 to 2023
$3.0M
Mitochondria-anchored protein complexes in piRNA biogenesis and functionR01GM132490 · NIGMS · MICHIGAN STATE UNIVERSITY · PI CHEN, CHEN · 2019 to 2022
$1.2M
NICHD NIH HHS R01 HD084494NIGMS NIH HHS R01 GM132490
6 · The paper itself

Abstract

PIWI-interacting RNAs (piRNAs) play critical and conserved roles in transposon silencing and gene regulation in the animal germline. Three distinct piRNA populations are present during mouse spermatogenesis: fetal piRNAs in fetal/perinatal testes, pre-pachytene and pachytene piRNAs in postnatal testes. PNLDC1 is required for piRNA 3' end maturation in multiple species. However, whether PNLDC1 is the bona fide piRNA trimmer and the physiological role of 3' trimming of different piRNA populations in spermatogenesis in mammals remain unclear. Here, by inactivating Pnldc1 exonuclease activity in vitro and in mice, we reveal that the PNLDC1 trimmer activity is essential for spermatogenesis and male fertility. PNLDC1 catalytic activity is required for both fetal and postnatal piRNA 3' end trimming. Despite this, postnatal piRNA trimming but not fetal piRNA trimming is critical for LINE1 transposon silencing. Furthermore, conditional inactivation of Pnldc1 in postnatal germ cells causes LINE1 transposon de-repression and spermatogenic arrest in mice, indicating that germline-specific postnatal piRNA trimming is essential for transposon silencing and germ cell development. Our findings highlight the germ cell-intrinsic role of PNLDC1 and piRNA trimming in mammals to safeguard the germline genome and promote fertility.

Indexed as

Gene SilencingLong Interspersed Nucleotide ElementsRNA, Small InterferingSpermatogenesisTestisAnimalsDNA Transposable ElementsFertilityGerm CellsMaleMicePiwi-Interacting RNADNA Transposable ElementsPiwi-Interacting RNARNA, Small Interfering

Identifiers

PMID39312580
PMCPMC11449332

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.