Evidence map›Paper›PMID 39312476›Full record

ArticleAdvanced science (Weinheim, Baden-Wurttemberg, Germany)2024

Evolution and Domestication of a Novel Biosynthetic Gene Cluster Contributing to the Flavonoid Metabolism and High-Altitude Adaptability of Plants in the Fagopyrum Genus.

Xu Huang, Yuqi He, Kaixuan Zhang, Yaliang Shi, Hui Zhao, Dili Lai, Hao Lin, Xiangru Wang, Zhimin Yang, Yawen Xiao and 8 more

Erratum issuedAbstract read
In one paragraph

Article in Advanced science (Weinheim, Baden-Wurttemberg, Germany), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

18 authors.

Xu HuangNational Key Facility for Crop Gene Resources and Genetic Improvement Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Yuqi HeNational Key Facility for Crop Gene Resources and Genetic Improvement Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Kaixuan ZhangNational Key Facility for Crop Gene Resources and Genetic Improvement Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Yaliang ShiNational Key Facility for Crop Gene Resources and Genetic Improvement Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Hui Zhao
Dili LaiNational Key Facility for Crop Gene Resources and Genetic Improvement Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Hao LinNational Key Facility for Crop Gene Resources and Genetic Improvement Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Xiangru WangNational Key Facility for Crop Gene Resources and Genetic Improvement Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Zhimin YangNational Key Facility for Crop Gene Resources and Genetic Improvement Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Yawen XiaoNational Key Facility for Crop Gene Resources and Genetic Improvement Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Wei LiNational Key Facility for Crop Gene Resources and Genetic Improvement Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Yinan OuyangNational Key Facility for Crop Gene Resources and Genetic Improvement Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Sun Hee WooDepartment of Agronomy, Chungbuk National University, Cheongju, 28644, South Korea.
Muriel QuinetGroupe de Recherche en Physiologie Végétale (GRPV), Earth and Life Institute-Agronomy (ELI-A), Université Catholique de Louvain, Croix du Sud 45, boîte L7.07.13, Louvain-la-Neuve, B-1348, Belgium.
Milen I GeorgievLaboratory of Metabolomics, Institute of Microbiology, Bulgarian Academy of Sciences, Plovdiv, 4000, Bulgaria.
Alisdair R FernieCenter of Plant Systems Biology and Biotechnology, Plovdiv, 4000, Bulgaria.
Xu LiuNational Key Facility for Crop Gene Resources and Genetic Improvement Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Meiliang ZhouNational Key Facility for Crop Gene Resources and Genetic Improvement Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.ORCID 0000-0001-5175-3684

Funding

National Key R&D Program of China 2023YFF1002500National Natural Science Foundation of China 32161143005National Natural Science Foundation of China 32241042National Natural Science Foundation of China 32301794the European Union's Horizon 2020 research and innovation programme, project PlantaSYST 664620the European Union's Horizon 2020 research and innovation programme, project PlantaSYST 739582Youth Innovation Program of Chinese Academy of Agricultural Sciences Y2022QC02
6 · The paper itself

Abstract

The diversity of secondary metabolites is an important means for plants to cope with the complex and ever-changing terrestrial environment. Plant biosynthetic gene clusters (BGCs) are crucial for the biosynthesis of secondary metabolites. The domestication and evolution of BGCs and how they affect plant secondary metabolites biosynthesis and environmental adaptation are still not fully understood. Buckwheat exhibits strong resistance and abundant secondary metabolites, especially flavonoids, allowing it to thrive in harsh environments. A non-canonical BGC named UFGT3 cluster is identified, which comprises a phosphorylase kinase (PAK), two transcription factors (MADS1/2), and a glycosyltransferase (UFGT3), forming a complete molecular regulatory module involved in flavonoid biosynthesis. This cluster is selected during Tartary buckwheat domestication and is widely present in species of the Fagopyrum genus. In wild relatives of cultivated buckwheat, a gene encoding anthocyanin glycosyltransferase (AGT), which glycosylates pelargonidin into pelargonidin-3-O-glucoside, is found inserted into this cluster. The pelargonidin-3-O-glucoside can help plants resist UV stress, endowing wild relatives with stronger high-altitude adaptability. This study provides a new research paradigm for the evolutionary dynamics of plant BGCs, and offers new perspectives for exploring the mechanism of plant ecological adaptability driven by environmental stress through the synthesis of secondary metabolites.

Indexed as

AltitudeFagopyrumFlavonoidsMultigene FamilyAdaptation, PhysiologicalDomesticationEvolution, MolecularGene Expression Regulation, PlantPhylogenyFlavonoidsbuckwheatevolutionflavonoid metabolismnovel gene clusterUV resistance

Identifiers

PMID39312476
PMCPMC11578379

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.