Evidence map›Paper›PMID 39312175›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2025

TIRESIA and TISBE: Explainable Artificial Intelligence Based Web Platforms for the Transparent Assessment of the Developmental Toxicity of Chemicals and Drugs.

Maria Vittoria Togo, Fabrizio Mastrolorito, Nicola Gambacorta, Daniela Trisciuzzi, Anna Rita Tondo, Francesca Cutropia, Valentina Belgiovine, Cosimo Damiano Altomare, Nicola Amoroso, Orazio Nicolotti and 1 more

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Article in Methods in molecular biology (Clifton, N.J.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Maria Vittoria TogoDipartimento di Farmacia - Scienze del Farmaco, Università degli studi di Bari Aldo Moro, Bari, Italy.
Fabrizio MastroloritoDipartimento di Farmacia - Scienze del Farmaco, Università degli studi di Bari Aldo Moro, Bari, Italy.
Nicola GambacortaDipartimento di Farmacia - Scienze del Farmaco, Università degli studi di Bari Aldo Moro, Bari, Italy.
Daniela TrisciuzziDipartimento di Farmacia - Scienze del Farmaco, Università degli studi di Bari Aldo Moro, Bari, Italy.
Anna Rita TondoDipartimento di Farmacia - Scienze del Farmaco, Università degli studi di Bari Aldo Moro, Bari, Italy.
Francesca CutropiaDipartimento di Farmacia - Scienze del Farmaco, Università degli studi di Bari Aldo Moro, Bari, Italy.
Valentina BelgiovineDipartimento di Farmacia - Scienze del Farmaco, Università degli studi di Bari Aldo Moro, Bari, Italy.
Cosimo Damiano AltomareDipartimento di Farmacia - Scienze del Farmaco, Università degli studi di Bari Aldo Moro, Bari, Italy.
Nicola AmorosoDipartimento di Farmacia - Scienze del Farmaco, Università degli studi di Bari Aldo Moro, Bari, Italy.
Orazio NicolottiDipartimento di Farmacia - Scienze del Farmaco, Università degli studi di Bari Aldo Moro, Bari, Italy.
Fulvio CiriacoDipartimento di Chimica, Università degli studi di Bari Aldo Moro, Bari, Italy. fulvio.ciriaco@uniba.it.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Developmental toxicity is key human health endpoint, especially relevant for safeguarding maternal and child well-being. It is an object of increasing attention from international regulatory bodies such as the US EPA (US Environmental Protection Agency) and ECHA (European CHemicals Agency). In this challenging scenario, non-test methods employing explainable artificial intelligence based techniques can provide a significant help to derive transparent predictive models whose results can be easily interpreted to assess the developmental toxicity of new chemicals at very early stages. To accomplish this task, we have developed web platforms such as TIRESIA and TISBE.Based on a benchmark dataset, TIRESIA employs an explainable artificial intelligence approach combined with SHAP analysis to unveil the molecular features responsible for calculating the developmental toxicity. Descending from TIRESIA, TISBE employs a larger dataset, an explainable artificial intelligence framework based on a fragment-based fingerprint encoding, a consensus classifier, and a new double top-down applicability domain. We report here some practical examples for getting started with TIRESIA and TISBE.

Indexed as

Artificial IntelligenceAnimalsHumansInternetSoftwareToxicity TestsDevelopmental toxicityExplainable artificial intelligenceMachine learningPredictive toxicologyQSAR

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.