ArticleMethods in molecular biology (Clifton, N.J.)2025
Simulated Annealing for RNA Design with SIMARD.
Article in Methods in molecular biology (Clifton, N.J.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
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Who cites it
1 citing paper in PubMed.
- RNA design: update on computational frameworks and programs for inverse RNA folding.Briefings in bioinformatics · 2026Review
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Authors and funding
1 author.
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Abstract
Ribonucleic acid (RNA) design is the inverse of RNA folding. RNA folding aims to identify the most likely secondary structure into which a given strand of nucleotides will fold. RNA design algorithms, on the other hand, attempt to design a strand of nucleotides that will fold into a specified secondary structure. Despite the apparent NP-hard nature of RNA design, promising results can be achieved when formulated as a combinatorial optimization problem and approached with simple heuristics. The main focus of this paper is to describe an RNA design algorithm based on simulated annealing. Additionally, noteworthy features and results will be presented herein.
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Registered trials
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