Evidence map›Paper›PMID 39309795›Full record

ArticleHeliyon2024

Predicting biomarkers in laryngeal squamous cell carcinoma based on the cytokine-cytokine receptor interaction pathway.

Qingyong Chen, Dongqing Wang, Zhipeng Chen, Liqiang Lin, Qiang Shao, Han Zhang, Peng Li, Huaiqing Lv

Abstract read
In one paragraph

Article in Heliyon, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Qingyong ChenThe Second School of Clinical Medicine of Binzhou Medical University, Yan Tai, China.
Dongqing WangDepartment of Otorhinolaryngology, Linyi People's Hospital, Linyi, China.
Zhipeng ChenDepartment of Otorhinolaryngology, Linyi People's Hospital, Linyi, China.
Liqiang LinDepartment of Otorhinolaryngology, Linyi People's Hospital, Linyi, China.
Qiang ShaoDepartment of Otorhinolaryngology, Linyi People's Hospital, Linyi, China.
Han ZhangNo.One Clinical Medicine School of Binzhou Medical University, Bing Zhou, China.
Peng LiDepartment of Otorhinolaryngology, Linyi People's Hospital, Linyi, China.
Huaiqing LvDepartment of Otorhinolaryngology, Linyi People's Hospital, Linyi, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objective: To analyze and validate differential genes in the cytokine-cytokine receptor interaction CCRI pathway in laryngeal squamous cell carcinoma (LSCC) using bioinformatics and Mendelian randomization (MR) to find potential biomarkers for LSCC. Methods: Five sets of LSCC-related gene chips were downloaded from the GEO database, and four sets of combined datasets were randomly selected as the test set and one set as the validation set to screen for differential genes in the CCRI pathway; two-way Mendelian randomization was performed to analyze the causal relationship between cytokine receptor as the exposure factor and LSCC as the outcome variable; and the causal relationship was analyzed by DGIdb, Miranda, miRDB, miRWalk, TargetScan, spongeScan, and TISIDB databases to analyze the relationship between differential genes and drugs, immune cell infiltration, and mRNA-miNA-lncRNA interactions. Results: A total of 7 differentially expressed genes CD27, CXCL2, CXCL9, INHBA, IL6, CXCL11, and TNFRSF17 were screened for enrichment in the CCRI signaling pathway; MR analysis showed that the CCRI receptor was a risk factor for LSCC (IVW: OR = 1.629, 95 % CI:1.060-2.504, P = 0.026); Seven differential genes were correlated with drugs, immune cells and mRNA-miNA-lncRNA, respectively; the CCRI differential gene expression analysis in the validation set was consistent with the test set results. Conclusion: This study provided CCRI differential gene expression by bioinformatics, and MR analysis demonstrated that cytokine receptors are risk factors for LSCC, providing new ideas for the pathogenesis and therapeutic targets of LSCC.

Indexed as

BioinformaticsCeRNA regulatory networkCytokine-cytokine receptor interaction pathwayGene-drug interactionsImmune infiltrationLaryngeal squamous cell carcinomaMendelian randomization analysis

Identifiers

PMID39309795
PMCPMC11416252

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.