Evidence map›Paper›PMID 39308865›Full record

ArticleFrontiers in immunology2024

The nuclear GYF protein CD2BP2/U5-52K is required for T cell homeostasis.

Miriam Bertazzon, Almudena Hurtado-Pico, Carlos Plaza-Sirvent, Marc Schuster, Marco Preußner, Benno Kuropka, Fan Liu, Andor Zenon Amandus Kirsten, Xiao Jakob Schmitt, Benjamin König and 7 more

Abstract read
In one paragraph

Article in Frontiers in immunology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Miriam BertazzonDepartment of Chemistry and Biochemistry, Protein Biochemistry, Freie Universität Berlin, Berlin, Germany.
Almudena Hurtado-PicoDepartment of Chemistry and Biochemistry, Protein Biochemistry, Freie Universität Berlin, Berlin, Germany.
Carlos Plaza-SirventDepartment of Molecular Immunology, Ruhr-University Bochum, Bochum, Germany.
Marc SchusterSystems-Oriented Immunology and Inflammation Research Group, Helmholtz Centre for Infection Research, Braunschweig, Germany.
Marco PreußnerDepartment of Chemistry and Biochemistry, RNA Biochemistry, Freie Universität Berlin, Berlin, Germany.
Benno KuropkaDepartment of Chemistry and Biochemistry, Protein Biochemistry, Freie Universität Berlin, Berlin, Germany.
Fan LiuDepartment of Chemical Biology, Leibniz-Forschungsinstitut für Molekulare Pharmakologie, Berlin, Germany.
Andor Zenon Amandus KirstenDepartment of Chemistry and Biochemistry, Protein Biochemistry, Freie Universität Berlin, Berlin, Germany.
Xiao Jakob SchmittDepartment of Chemistry and Biochemistry, Protein Biochemistry, Freie Universität Berlin, Berlin, Germany.
Benjamin KönigDepartment of Chemistry and Biochemistry, Protein Biochemistry, Freie Universität Berlin, Berlin, Germany.
Miguel Álvaro-BenitoDepartment of Chemistry and Biochemistry, Protein Biochemistry, Freie Universität Berlin, Berlin, Germany.
Esam T AbualrousDepartment of Chemistry and Biochemistry, Protein Biochemistry, Freie Universität Berlin, Berlin, Germany.
Gesa I AlbertDepartment of Chemistry and Biochemistry, Protein Biochemistry, Freie Universität Berlin, Berlin, Germany.
Stefanie KlicheInstitute of Molecular and Clinical Immunology, Health Campus Immunology, Infectiology and Inflammation GCI3, Otto-von-Guericke-University, Magdeburg, Germany.
Florian HeydDepartment of Chemistry and Biochemistry, RNA Biochemistry, Freie Universität Berlin, Berlin, Germany.
Ingo SchmitzDepartment of Molecular Immunology, Ruhr-University Bochum, Bochum, Germany.
Christian FreundDepartment of Chemistry and Biochemistry, Protein Biochemistry, Freie Universität Berlin, Berlin, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The question whether interference with the ubiquitous splicing machinery can lead to cell-type specific perturbation of cellular function is addressed here by T cell specific ablation of the general U5 snRNP assembly factor CD2BP2/U5-52K. This protein defines the family of nuclear GYF domain containing proteins that are ubiquitously expressed in eukaryotes with essential functions ascribed to early embryogenesis and organ function. Abrogating CD2BP2/U5-52K in T cells, allows us to delineate the consequences of splicing machinery interferences for T cell development and function. Increased T cell lymphopenia and T cell death are observed upon depletion of CD2BP2/U5-52K. A substantial increase in exon skipping coincides with the observed defect in the proliferation/differentiation balance in the absence of CD2BP2/U5-52K. Prominently, skipping of exon 7 in Mdm4 is observed, coinciding with upregulation of pro-apoptotic gene expression profiles upon CD2BP2/U5-52K depletion. Furthermore, we observe enhanced sensitivity of naïve T cells compared to memory T cells to changes in CD2BP2/U5-52K levels, indicating that depletion of this general splicing factor leads to modulation of T cell homeostasis. Given the recent structural characterization of the U5 snRNP and the crosslinking mass spectrometry data given here, design of inhibitors of the U5 snRNP conceivably offers new ways to manipulate T cell function in settings of disease.

Indexed as

HomeostasisT-LymphocytesAnimalsApoptosisCell DifferentiationCell ProliferationLymphopeniaMiceRibonucleoprotein, U5 Small NuclearRNA SplicingRibonucleoprotein, U5 Small NuclearCD2BP2/U5-52Kexon skippingMdm4p53spliceosomeT cell

Identifiers

PMID39308865
PMCPMC11412891

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.