Evidence map›Paper›PMID 39308343›Full record

ArticleJournal of cell science2024

Mature microRNA-binding protein QKI suppresses extracellular microRNA let-7b release.

Kyung-Won Min, Kyoung-Min Choi, Hyejin Mun, Seungbeom Ko, Ji Won Lee, Cari A Sagum, Mark T Bedford, Young-Kook Kim, Joe R Delaney, Jung-Hyun Cho and 22 more

Abstract read
In one paragraph

Article in Journal of cell science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. 5EU-Based Tracking of RNA Transfer Through Extracellular Vesicles.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

32 authors.

Kyung-Won MinDepartment of Biochemistry and Molecular Biology, Medical University of South Carolina, Charleston, SC 29425, USA.
Kyoung-Min ChoiDepartment of Oncology Science, College of Medicine, University of Oklahoma, Oklahoma City, OK 73104, USA.
Hyejin MunDepartment of Oncology Science, College of Medicine, University of Oklahoma, Oklahoma City, OK 73104, USA.
Seungbeom KoDepartment of Biochemistry and Molecular Biology, Medical University of South Carolina, Charleston, SC 29425, USA.ORCID 0000-0002-8457-3134
Ji Won LeeDepartment of Biology, Gangneung-Wonju National University, Gangneung 25457, Republic of Korea.ORCID 0009-0009-9951-3685
Cari A SagumDepartment of Epigenetics and Molecular Carcinogenesis, the University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Mark T BedfordDepartment of Epigenetics and Molecular Carcinogenesis, the University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Young-Kook KimDepartment of Biochemistry, Chonnam National University Medical School, Hwasun 58128, Republic of Korea.
Joe R DelaneyDepartment of Biochemistry and Molecular Biology, Medical University of South Carolina, Charleston, SC 29425, USA.
Jung-Hyun ChoDepartment of Biochemistry and Molecular Biology, Medical University of South Carolina, Charleston, SC 29425, USA.ORCID 0000-0002-1952-5611
Ted M DawsonNeuroregeneration and Stem Cell Programs, Institute for Cell Engineering, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.ORCID 0000-0002-6459-0893
Valina L DawsonNeuroregeneration and Stem Cell Programs, Institute for Cell Engineering, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.
Waleed TwalRegenerative Medicine and Cell Biology, Medical University of South Carolina, Charleston, SC 29425, USA.
Dong-Chan KimR&D center, NOSQUEST Inc., Seongnam, Gyeonggi 13494, Republic of Korea.ORCID 0000-0002-9361-8023
Clarisse H PanganibanDepartment of Pathology and Laboratory Medicine, Medical University of South Carolina, Charleston, SC 29425, USA.
Hainan LangDepartment of Pathology and Laboratory Medicine, Medical University of South Carolina, Charleston, SC 29425, USA.
Xin ZhouDepartment of Cancer Biology, the University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Seula ShinDepartment of Cancer Biology, the University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Jian HuDepartment of Cancer Biology, the University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Tilman HeiseDepartment for Pediatric Hematology, Oncology and Stem Cell Transplantation, University Hospital Regensburg, Franz-Josef-Strauss Allee 11, 93053 Regensburg, Germany.
Sang-Ho KwonDepartment of Cellular Biology and Anatomy, Medical College of Georgia, Augusta University, Augusta, GA 30912, USA.
Dongsan KimNeuroregeneration and Stem Cell Programs, Institute for Cell Engineering, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.
Young Hwa KimDepartment of Anatomy and Neurobiology, College of Medicine, Kyung Hee University, Seoul 02447, Republic of Korea.
Sung-Ung KangNeuroregeneration and Stem Cell Programs, Institute for Cell Engineering, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.
Kyungmin KimDepartment of Biology, Gangneung-Wonju National University, Gangneung 25457, Republic of Korea.
Sydney LewisDepartment of Oncology Science, College of Medicine, University of Oklahoma, Oklahoma City, OK 73104, USA.
Ahmet ErogluDepartment of Oncology Science, College of Medicine, University of Oklahoma, Oklahoma City, OK 73104, USA.
Seonghyun RyuDepartment of Pharmaceutical Sciences, College of Pharmacy, University of Oklahoma Health, Sciences Center, Oklahoma City, OK 73117, USA.ORCID 0000-0002-3384-7852
Dongin KimDepartment of Pharmaceutical Sciences, College of Pharmacy, University of Oklahoma Health, Sciences Center, Oklahoma City, OK 73117, USA.
Jeong Ho ChangDepartment of Biology Education, Kyungpook National University, Daegu 41566, Republic of Korea.
Junyang JungDepartment of Anatomy and Neurobiology, College of Medicine, Kyung Hee University, Seoul 02447, Republic of Korea.
Je-Hyun YoonDepartment of Biochemistry and Molecular Biology, Medical University of South Carolina, Charleston, SC 29425, USA.ORCID 0000-0001-7615-8654

Funding

SPEECH UNDERSTANDING IN REALISTIC ENVIRONMENTSP50DC000422 · NIDCD · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI DUBNO, JUDY R · 1989 to 2025
$45.3M
UNDERSTANDING NO SIGNALING RESULTING IN NEUROPROTECTION.P50DA000266 · NIDA · JOHNS HOPKINS UNIVERSITY · PI BARABAN, JAY M · 1985 to 2017
$45.2M
SOUTH CAROLINA COBRE IN OXIDANTS, REDOX BALANCE AND STRESS SIGNALINGP20GM103542 · NIGMS · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI TEW, KENNETH D. · 2012 to 2020
$20.2M
Poly (ADP-Ribose) and AIF in Neuronal InjuryR01NS067525 · NINDS · JOHNS HOPKINS UNIVERSITY · PI VALINA L. DAWSON, Ted M. Dawson · 2010 to 2026
$6.0M
SC COBRE for Developmentally Based Cardiovascular DiseasesP30GM103342 · NIGMS · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI MARKWALD, ROGER R · 2012 to 2016
$5.5M
Parthanatos, AIF and PAAN-1 in Neuronal InjuryR37NS067525 · NINDS · JOHNS HOPKINS UNIVERSITY · PI DAWSON, TED M., DAWSON, VALINA L. · 2015 to 2021
$5.3M
Region-Specific Vulnerability of the Lewy Body Dementia's BrainR01NS123456 · NINDS · JOHNS HOPKINS UNIVERSITY · PI KAM, TAE-IN, KANG, SUNG UNG · 2021 to 2025
$3.6M
Role of Quaking gene in regulating the niche-independent stemness of glioma stem cellsR37CA214800 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI HU, JIAN · 2018 to 2022
$2.0M
Auditory Nerve Degeneration and RepairR01DC012058 · NIDCD · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI LANG, HAINAN · 2012 to 2016
$1.9M
Regulation of exosome release and its role in acute kidney injury.R01DK120510 · NIDDK · AUGUSTA UNIVERSITY · PI KWON, KENNETH · 2019 to 2023
$1.7M
Intestinal exosomes in alcohol-induces liver injuryR01AA027532 · NIAAA · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI YOON, JE-HYUN · 2019 to 2023
$1.7M
The Functional Analysis of the Coactivator CARM1R01GM126421 · NIGMS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI BEDFORD, MARK T. · 2018 to 2021
$1.4M
Brockman FoundationCancer Prevention and Research Institute of Texas RP120348Medical College of Georgia, Augusta UniversityMedical University of South CarolinaNational Research Foundation of Korea NRF-2022R1A2C4001528NCI NIH HHS CA207729NCI NIH HHS K99 CA207729NCI NIH HHS R00 CA207729NCI NIH HHS R01 CA172567NCI NIH HHS R37 CA214800NIAAA NIH HHS R01 AA027532NIDA NIH HHS P50 DA000266NIDCD NIH HHS P50 DC000422NIDCD NIH HHS R01 DC012058NIDCD NIH HHS R56 DC012058NIDDK NIH HHS R01 DK120510NIGMS NIH HHS P20 GM103542NIGMS NIH HHS P30 GM103342NIGMS NIH HHS R01 GM126421NIH HHS 5R37CA214800NIH HHS R01AA027532NIH HHS R01NS123456NINDS NIH HHS R01 NS067525NINDS NIH HHS R01 NS123456NINDS NIH HHS R01NS123456NINDS NIH HHS R37 NS067525University of Oklahoma
6 · The paper itself

Abstract

Argonaute (AGO), a component of RNA-induced silencing complexes (RISCs), is a representative RNA-binding protein (RBP) known to bind with mature microRNAs (miRNAs) and is directly involved in post-transcriptional gene silencing. However, despite the biological significance of miRNAs, the roles of other miRNA-binding proteins (miRBPs) remain unclear in the regulation of miRNA loading, dissociation from RISCs and extracellular release. In this study, we performed protein arrays to profile miRBPs and identify 118 RBPs that directly bind to miRNAs. Among those proteins, the RBP quaking (QKI) inhibits extracellular release of the mature microRNA let-7b by controlling the loading of let-7b into extracellular vesicles via additional miRBPs such as AUF1 (also known as hnRNPD) and hnRNPK. The enhanced extracellular release of let-7b after QKI depletion activates Toll-like receptor 7 (TLR7) and promotes the production of proinflammatory cytokines in recipient cells, leading to brain inflammation in the mouse cortex. Thus, this study reveals the contribution of QKI to the inhibition of brain inflammation via regulation of extracellular let-7b release.

Indexed as

MicroRNAsRNA-Binding ProteinsAnimalsCytokinesExtracellular VesiclesHEK293 CellsHeterogeneous-Nuclear Ribonucleoprotein DHeterogeneous Nuclear Ribonucleoprotein D0HumansMiceMice, Inbred C57BLToll-Like Receptor 7CytokinesHeterogeneous-Nuclear Ribonucleoprotein DHeterogeneous Nuclear Ribonucleoprotein D0MicroRNAsmirnlet7 microRNA, humanmirnlet7 microRNA, mouseQKI protein, humanQk protein, mouseRNA-Binding ProteinsToll-Like Receptor 7AGO2Extracellular vesicular miRNAlet-7bQKIRNA-binding protein

Identifiers

PMID39308343
PMCPMC11574364

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.