Evidence map›Paper›PMID 39304831›Full record

ArticleBMC veterinary research2024

Whole genome characteristics of hedgehog coronaviruses from Poland and analysis of the evolution of the Spike protein for its interspecies transmission potential.

Katarzyna Domanska-Blicharz, Anna Lisowska, Justyna Opolska, Jakub J Ruszkowski, Maciej Gogulski, Małgorzata Pomorska-Mól

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Article in BMC veterinary research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Katarzyna Domanska-BlicharzDepartment of Poultry Diseases, National Veterinary Research Institute, al. Partyzantów 57, Puławy, 24-100, Poland. domanska@piwet.pulawy.pl.
Anna LisowskaDepartment of Poultry Diseases, National Veterinary Research Institute, al. Partyzantów 57, Puławy, 24-100, Poland.
Justyna OpolskaDepartment of Poultry Diseases, National Veterinary Research Institute, al. Partyzantów 57, Puławy, 24-100, Poland.
Jakub J RuszkowskiDepartment of Animal Anatomy, University of Life Sciences in Poznań, ul. Wojska Polskiego 71C, Poznań, 60-625, Poland.
Maciej GogulskiDepartment of Animal Anatomy, University of Life Sciences in Poznań, ul. Wojska Polskiego 71C, Poznań, 60-625, Poland.
Małgorzata Pomorska-MólDepartment of Preclinical Sciences and Infectious Diseases, University of Life Sciences in Poznań, ul. Wołyńska 35, Poznań, 60-637, Poland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe hedgehogs have been recently identified as possible reservoir of Middle East respiratory syndrome coronavirus like (MERS-CoV-like). These viruses were classified as a distinct Betacoronavirus erinacei (BCoV-Eri) species within the MerBCoV-Eriirus subgenus. As coronaviruses are known for their ability to jump between different hosts, including humans, this can pose a particular threat to people in direct contact with hedgehogs, such as those working at animal asylums. Our previous studies have shown the presence of BCoV-Eri strains in animals collected in the wildlife rehabilitation centre. This study aimed to investigate the presence of CoV in subsequent hedgehogs collected from the urban area of Poland and their molecular characteristics.

resultsMonitoring for the presence of coronavirus infection in hedgehogs revealed five positive individuals. The presence of BCoV-Eri was found in a total of 20% of animals tested. Our analyses revealed no correlation between CoVs positivity and animal health conditions but a higher probability of such infection in juveniles and females. The whole genome of two Polish Hedgehog coronavirus 1 strains were sequenced and compared with available counterparts from European and Asian countries. Phylogenetic analysis showed that both CoV strains formed common cluster with other similar MerBCoV-Eriirus, but they were also found to be genetically variable and most changes in the S protein were identified. Our analysis revealed that some S protein sites of the Hedgehog coronavirus 1 strains evolved under positive selection pressure and of five such sites, three are in the S1 region while the other two in the S2 region of the Spike.

conclusionsBCoV-Eri is to some extent prevalent in wildlife asylums in Poland. Given that the S protein of BCoVs-Eri is highly variable and that some sites of this protein evolve under positive selection pressure, these strains could potentially acquire a favourable feature for cross-species transmission. Consequently, the threat to humans working in such asylums is particularly high. Adequate biosecurity safeguards, but also human awareness of such risks, are therefore essential.

Indexed as

Coronavirus InfectionsGenome, ViralHedgehogsPhylogenySpike Glycoprotein, CoronavirusAnimalsCoronavirusEvolution, MolecularFemaleMalePolandSpike Glycoprotein, CoronavirusBetacoronavirusHedgehogPolandS geneWhole genome

Identifiers

PMID39304831
PMCPMC11415979

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.