Evidence map›Paper›PMID 39300661›Full record

ArticleThe American journal of clinical nutrition2024

Multiplexed immunohistochemical evaluation of small bowel inflammatory and epithelial parameters in environmental enteric dysfunction.

Kelley VanBuskirk, Monica Mweetwa, Tad Kolterman, Shyam Raghavan, Tahmeed Ahmed, S Asad Ali, Sm Khodeza Nahar Begum, Ellen Besa, Donna M Denno, Zehra Jamil and 9 more

Abstract read
In one paragraph

Article in The American journal of clinical nutrition, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Mild Duodenal Mucosal Injury and Increased Type I Interferon Signaling Are Preludes to Celiac Disease.Laboratory investigation; a journal of technical methods and pathology · 2025
    Article
  4. Article
  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Kelley VanBuskirkDepartment of Global Health, University of Washington School of Public Health, Seattle, WA, United States.
Monica MweetwaTropical Gastroenterology and Nutrition Group, University of Zambia School of Medicine, Lusaka, Zambia.
Tad KoltermanDepartment of Pathology, University of Virginia School of Medicine, Charlottesville, VA, United States.
Shyam RaghavanDepartment of Pathology, University of Virginia School of Medicine, Charlottesville, VA, United States.
Tahmeed AhmedNutrition Research Division, International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh.
S Asad AliDepartment of Paediatrics and Child Health, Aga Khan University, Karachi, Pakistan.
Sm Khodeza Nahar BegumDepartment of Pathology, Bangladesh Specialized Hospital, Dhaka, Bangladesh.
Ellen BesaTropical Gastroenterology and Nutrition Group, University of Zambia School of Medicine, Lusaka, Zambia.
Donna M DennoDepartment of Pediatrics, University of Washington School of Medicine, Seattle, WA, United States.
Zehra JamilDepartment of Biological and Biomedical Sciences, Aga Khan University, Karachi, Pakistan.
Paul KellyBlizard Institute, Barts & the London School of Medicine, Queen Mary University of London, London, United Kingdom.
Mustafa MahfuzNutrition Research Division, International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh.
Sean R MooreDepartment of Pediatrics, University of Virginia School of Medicine, Charlottesville, VA, United States.
Samer MouksassiCertara, Princeton, NJ, United States.
William A PetriDepartment of Medicine, University of Virginia School of Medicine, Charlottesville, VA, United States.
Phillip I TarrDepartment of Pediatrics, Washington University School of Medicine, St. Louis, MO, United States.
Peter B SullivanDepartment of Paediatrics, Children's Hospital, University of Oxford, Oxford, United Kingdom.
Christopher A MoskalukDepartment of Pathology, University of Virginia School of Medicine, Charlottesville, VA, United States. Electronic address: cam5p@virginia.edu.
EEDBI Consortium

Funding

Washington University DDRCC Supplemental Equipment RequestP30DK052574 · NIDDK · WASHINGTON UNIVERSITY · PI Jeffrey Wade Brown · 2000 to 2026
$30.8M
NIDDK NIH HHS P30 DK052574
6 · The paper itself

Abstract

backgroundEnvironmental enteric dysfunction (EED) is characterized by reduced absorptive capacity and barrier function of the small intestine, leading to poor ponderal and linear childhood growth.

objectivesTo further define gene expression patterns that are associated with EED to uncover new pathophysiology of this disorder.

methodsDuodenal biopsies from cohorts of children with EED from Bangladesh, Pakistan and Zambia were analyzed by immunohistochemistry (IHC) to interrogate gene products that distinguished differentiation and various biochemical pathways in immune and epithelial cells, some identified by prior bulk RNA sequence analyses. Immunohistochemical staining was digitally quantified from scanned images and compared to cohorts of North American children with celiac disease (gluten-sensitive enteropathy) or with no known enteric disease and no pathologic abnormality (NPA) detected in their clinical biopsies.

resultsAfter multivariable statistical analysis, we identified statistically significant (P < 0.05, 2-tailed t-test) elevated signals representing cluster of differentiation 45 (80%; 95% confidence interval [CI]: 24%, 127%), lipocalin 2 (659%; 95% CI: 198%, 1838%), and regenerating family 1 beta (221%; 95% CI: 47%, 600%) and lower signals corresponding to granzyme B (-74%; 95% CI: -82%, -62%), and sucrase isomaltase (-58%; 95% CI: -75%, -29%) in EED biopsies compared with NPA biopsies. Computerized algorithms also detected statistically significant elevation in intraepithelial lymphocytes (49%; 95% CI: 9%, 105%) and proliferation of leukocytes (267%; 95% CI: 92%, 601%) in EED biopsies compared with NPA biopsies.

conclusionsOur results support a model of chronic epithelial stress that decreases epithelial differentiation and absorptive function. The close association of several IHC parameters with manual histologic scoring suggests that automated digital quantification of IHC panels complements traditional histomorphologic assessment in EED.

Indexed as

ImmunohistochemistryCeliac DiseaseChildChild, PreschoolDuodenumFemaleHumansInfantIntestinal MucosaIntestine, SmallMalePakistanZambiacellular differentiationenteropathyenvironmental enteric dysfunctiongene expressionhistologyhistopathologyimmunohistochemistry

Identifiers

PMID39300661
PMCPMC13169041

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.