Evidence map›Paper›PMID 39300577›Full record

ArticleMicrobiome2024

Hyperexpansion of genetic diversity and metabolic capacity of extremophilic bacteria and archaea in ancient Andean lake sediments.

María Ángeles Lezcano, Till L V Bornemann, Laura Sánchez-García, Daniel Carrizo, Panagiotis S Adam, Sarah P Esser, Nathalie A Cabrol, Alexander J Probst, Víctor Parro

Abstract read
In one paragraph

Article in Microbiome, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

María Ángeles LezcanoCentro de Astrobiología (CAB), CSIC-INTA, 28850, Torrejón de Ardoz, Madrid, Spain. mangeles.lezcano@gmail.com.
Till L V BornemannEnvironmental Metagenomics, Research Center One Health Ruhr of the University Alliance Ruhr, Faculty of Chemistry, University of Duisburg-Essen, Essen, Germany.
Laura Sánchez-GarcíaCentro de Astrobiología (CAB), CSIC-INTA, 28850, Torrejón de Ardoz, Madrid, Spain.
Daniel CarrizoCentro de Astrobiología (CAB), CSIC-INTA, 28850, Torrejón de Ardoz, Madrid, Spain.
Panagiotis S AdamEnvironmental Metagenomics, Research Center One Health Ruhr of the University Alliance Ruhr, Faculty of Chemistry, University of Duisburg-Essen, Essen, Germany.
Sarah P EsserEnvironmental Metagenomics, Research Center One Health Ruhr of the University Alliance Ruhr, Faculty of Chemistry, University of Duisburg-Essen, Essen, Germany.
Nathalie A CabrolSETI Institute, 339 Bernardo Avenue, Suite 200, Mountain View, CA, 94043, USA.
Alexander J ProbstEnvironmental Metagenomics, Research Center One Health Ruhr of the University Alliance Ruhr, Faculty of Chemistry, University of Duisburg-Essen, Essen, Germany.
Víctor ParroCentro de Astrobiología (CAB), CSIC-INTA, 28850, Torrejón de Ardoz, Madrid, Spain.

Funding

German Federal Ministry of Education and Research 161L0285EGerman Research Foundation DFG PR1603/2-1NASA Astrobiology Institute NAI-CAN7, 13NAI7_2-0018Spanish Ministry of Science and Innovation/State Agency of Research FJC2018-037246-ISpanish Ministry of Science and Innovation/State Agency of Research RTI2018-094368-B-I0Spanish Ministry of Science and Innovation/State Agency of Research RYC-2014-19446Spanish Ministry of Science and Innovation/State Agency of Research RYC2018-023943-ISpanish Ministry of Science and Innovation/State Agency of Research (EU Youth Employment Initiative ) PEJD-2017- POST/TIC-4119
6 · The paper itself

Abstract

backgroundThe Andean Altiplano hosts a repertoire of high-altitude lakes with harsh conditions for life. These lakes are undergoing a process of desiccation caused by the current climate, leaving terraces exposed to extreme atmospheric conditions and serving as analogs to Martian paleolake basins. Microbiomes in Altiplano lake terraces have been poorly studied, enclosing uncultured lineages and a great opportunity to understand environmental adaptation and the limits of life on Earth. Here we examine the microbial diversity and function in ancient sediments (10.3-11 kyr BP (before present)) from a terrace profile of Laguna Lejía, a sulfur- and metal/metalloid-rich saline lake in the Chilean Altiplano. We also evaluate the physical and chemical changes of the lake over time by studying the mineralogy and geochemistry of the terrace profile.

resultsThe mineralogy and geochemistry of the terrace profile revealed large water level fluctuations in the lake, scarcity of organic carbon, and high concentration of SO

conclusionsThe high number of novel bacterial and archaeal MAGs in the Laguna Lejía indicates the wide prokaryotic diversity discovered. In addition, the detection of genes in unexpected taxonomic groups has significant implications for the expansion of microorganisms involved in the biogeochemical cycles of carbon, nitrogen, and sulfur. Video Abstract.

Indexed as

ArchaeaBacteriaGenetic VariationGeologic SedimentsLakesChileExtremophilesMicrobiotaPhylogenyRNA, Ribosomal, 16SRNA, Ribosomal, 16SAncient sedimentsAndean AltiplanoGenome-resolved metagenomicsLipid biomarkersMarsMicrobial dark matterMicrobial metabolism

Identifiers

PMID39300577
PMCPMC11411797

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.