Evidence map›Paper›PMID 39299238›Full record

ArticleImmunity2024

Intestinal immunity in C. elegans is activated by pathogen effector-triggered aggregation of the guard protein TIR-1 on lysosome-related organelles.

Samantha Y Tse-Kang, Khursheed A Wani, Nicholas D Peterson, Amanda Page, Fiachra Humphries, Read Pukkila-Worley

Abstract read
In one paragraph

Article in Immunity, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. bioRxiv : the preprint server for biology · 2026
    Article
  4. Review
  5. Article
  6. Review
  7. Review
  8. Review
  9. Genome Sequencing of the Antibiotic-ResistantInternational journal of molecular sciences · 2025
    Article
  10. Review
  11. Article
  12. Modeling Host-Pathogen Interactions inInternational journal of molecular sciences · 2024
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Samantha Y Tse-KangDivision of Infectious Diseases and Immunology, Department of Medicine, University of Massachusetts Chan Medical School, Worcester, MA 01655, USA; Program in Innate Immunity, University of Massachusetts Chan Medical School, Worcester, MA 01655, USA.
Khursheed A WaniDivision of Infectious Diseases and Immunology, Department of Medicine, University of Massachusetts Chan Medical School, Worcester, MA 01655, USA; Program in Innate Immunity, University of Massachusetts Chan Medical School, Worcester, MA 01655, USA.
Nicholas D PetersonDivision of Infectious Diseases and Immunology, Department of Medicine, University of Massachusetts Chan Medical School, Worcester, MA 01655, USA; Program in Innate Immunity, University of Massachusetts Chan Medical School, Worcester, MA 01655, USA.
Amanda PageDivision of Infectious Diseases and Immunology, Department of Medicine, University of Massachusetts Chan Medical School, Worcester, MA 01655, USA; Program in Innate Immunity, University of Massachusetts Chan Medical School, Worcester, MA 01655, USA.
Fiachra HumphriesDivision of Innate Immunity, Department of Medicine, University of Massachusetts Chan Medical School, Worcester, MA 01655, USA; Program in Innate Immunity, University of Massachusetts Chan Medical School, Worcester, MA 01655, USA.
Read Pukkila-WorleyDivision of Infectious Diseases and Immunology, Department of Medicine, University of Massachusetts Chan Medical School, Worcester, MA 01655, USA; Program in Innate Immunity, University of Massachusetts Chan Medical School, Worcester, MA 01655, USA. Electronic address: read.pukkila-worley@umassmed.edu.

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
Medical Scientist Training at UMMS Administrative SupplementT32GM107000 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI KIEFE, CATARINA I. · 2013 to 2022
$4.9M
An Immune Surveillance Network in C. elegansR01AI130289 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI PUKKILA-WORLEY, READ · 2017 to 2025
$4.6M
Sensing bacterial patterns of pathogenesis by an enzymatic TIR proteinR01AI159159 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI Read Pukkila-Worley · 2021 to 2026
$3.7M
Innate Immunity Training ProgramT32AI095213 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI SILVERMAN, NEAL · 2011 to 2025
$2.5M
Training in the Molecular Basis of Autoimmunity and AutoinflammationT32AI132152 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI Katherine A. Fitzgerald, Ann Marshak-Rothstein · 2018 to 2026
$1.6M
Neuroendocrine regulation of intestinal epithelial immunity in C. elegansR21AI163430 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI PUKKILA-WORLEY, READ · 2021 to 2022
$461k
Detection of intestinal pathogens through host surveillance of bacterial toxinsF30DK127690 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI TSE, SAMANTHA · 2021 to 2025
$171k
Pathogen sensing by nuclear hormone receptors in C. elegans intestinal epithelial cellsF30AI150127 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI PETERSON, NICHOLAS · 2020 to 2023
$132k
NIAID NIH HHS F30 AI150127NIAID NIH HHS R01 AI130289NIAID NIH HHS R01 AI159159NIAID NIH HHS R21 AI163430NIAID NIH HHS T32 AI095213NIAID NIH HHS T32 AI132152NIDDK NIH HHS F30 DK127690NIGMS NIH HHS T32 GM107000NIH HHS P40 OD010440
6 · The paper itself

Abstract

Toll/interleukin-1/resistance (TIR)-domain proteins with enzymatic activity are essential for immunity in plants, animals, and bacteria. However, it is not known how these proteins function in pathogen sensing in animals. We discovered that the lone enzymatic TIR-domain protein in the nematode C. elegans (TIR-1, homolog of mammalian sterile alpha and TIR motif-containing 1 [SARM1]) was strategically expressed on the membranes of a specific intracellular compartment called lysosome-related organelles. The positioning of TIR-1 on lysosome-related organelles enables intestinal epithelial cells in the nematode C. elegans to survey for pathogen effector-triggered host damage. A virulence effector secreted by the bacterial pathogen Pseudomonas aeruginosa alkalinized and condensed lysosome-related organelles. This pathogen-induced morphological change in lysosome-related organelles triggered TIR-1 multimerization, which engaged its intrinsic NAD

Indexed as

Caenorhabditis elegansCaenorhabditis elegans ProteinsImmunity, InnateLysosomesPseudomonas aeruginosaAnimalsHost-Pathogen InteractionsIntestinal MucosaIntestinesp38 Mitogen-Activated Protein KinasesPseudomonas InfectionsReceptors, G-Protein-CoupledCaenorhabditis elegans Proteinsp38 Mitogen-Activated Protein KinasesReceptors, G-Protein-Coupledtir-1 protein, C elegansCaenorhabditis eleganseffector-triggered immunityintestinal immunitylysosome-related organellesphenazinesPseudomonas aeruginosaSARM1TIR-1

Identifiers

PMID39299238
PMCPMC11464196

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.