Evidence map›Paper›PMID 39298584›Full record

ArticleScience (New York, N.Y.)2024

Large library docking identifies positive allosteric modulators of the calcium-sensing receptor.

Fangyu Liu, Cheng-Guo Wu, Chia-Ling Tu, Isabella Glenn, Justin Meyerowitz, Anat Levit Kaplan, Jiankun Lyu, Zhiqiang Cheng, Olga O Tarkhanova, Yurii S Moroz and 4 more

Abstract read
In one paragraph

Article in Science (New York, N.Y.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Library Docking for Cannabinoid-2 Receptor Ligands.Journal of medicinal chemistry · 2026
    Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Library docking for Cannabinoid-2 Receptor ligands.bioRxiv : the preprint server for biology · 2026
    Article
  13. Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors.

Fangyu Liu *Department of Pharmaceutical Chemistry, University of California, San Francisco, San Francisco, CA 94143, USA.ORCID 0000-0001-5022-0106
Cheng-Guo Wu *Department of Molecular and Cellular Physiology, Stanford University School of Medicine, Stanford, CA 94305, USA.ORCID 0000-0003-0514-6474
Chia-Ling TuSan Francisco VA Medical Center, Department of Medicine, University of California, San Francisco, San Francisco, CA 94158, USA.
Isabella GlennDepartment of Pharmaceutical Chemistry, University of California, San Francisco, San Francisco, CA 94143, USA.ORCID 0009-0002-6443-1873
Justin MeyerowitzDepartment of Molecular and Cellular Physiology, Stanford University School of Medicine, Stanford, CA 94305, USA.ORCID 0000-0001-7194-8286
Anat Levit KaplanDepartment of Pharmaceutical Chemistry, University of California, San Francisco, San Francisco, CA 94143, USA.ORCID 0000-0002-8217-3225
Jiankun LyuDepartment of Pharmaceutical Chemistry, University of California, San Francisco, San Francisco, CA 94143, USA.ORCID 0000-0002-0461-5454
Zhiqiang ChengSan Francisco VA Medical Center, Department of Medicine, University of California, San Francisco, San Francisco, CA 94158, USA.
Olga O TarkhanovaChemspace LLC, 02094 Kyiv, Ukraine.ORCID 0000-0003-1880-2872
Yurii S MorozChemspace LLC, 02094 Kyiv, Ukraine.ORCID 0000-0001-6073-002X
John J IrwinDepartment of Pharmaceutical Chemistry, University of California, San Francisco, San Francisco, CA 94143, USA.ORCID 0000-0002-1195-6417
Wenhan ChangSan Francisco VA Medical Center, Department of Medicine, University of California, San Francisco, San Francisco, CA 94158, USA.ORCID 0000-0001-6583-7176
Brian K ShoichetDepartment of Pharmaceutical Chemistry, University of California, San Francisco, San Francisco, CA 94143, USA.ORCID 0000-0002-6098-7367
Georgios SkiniotisDepartment of Molecular and Cellular Physiology, Stanford University School of Medicine, Stanford, CA 94305, USA.ORCID 0000-0003-0238-7846

Funding

Development and Testing of New Computational Methods for Ligand Discovery and MechanismR35GM122481 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Brian K Shoichet · 2017 to 2026
$8.5M
Skeletal Biology and Biomechanics (SBB) CoreP30AR075055 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI EDWARD C HSIAO · 2019 to 2026
$7.1M
A Web-Based Automatic Virtual Screening SystemR01GM071896 · NIGMS · UNIVERSITY OF TORONTO · PI IRWIN, JOHN J. · 2004 to 2024
$6.0M
Structural Basis of Signal Instigation Through Family C GPCRsR01NS122394 · NINDS · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI SKINIOTIS, GEORGIOS · 2021 to 2025
$3.4M
Mechanistic Basis of Calcium Sensing Receptor SignalingR01DK132902 · NIDDK · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI Georgios Skiniotis · 2022 to 2026
$3.1M
UCSF Core Center for Musculoskeletal Biology and MedicineP30AR066262 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MAJUMDAR, SHARMILA · 2014 to 2018
$3.0M
Vitamin D and beta-amyloid signaling in hyperparathyroidismRF1AG075742 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CHANG, WENHAN, KOH, JAMES · 2023 to 2025
$2.4M
Regulation of Parathyroid Functions By G-Protein Coupled ReceptorsR01DK122259 · NIDDK · NORTHERN CALIFORNIA INSTITUTE/RES/EDU · PI CHANG, WENHAN, VILARDAGA, JEAN-PIERRE · 2019 to 2023
$2.2M
Regulation of parathyroid function by the amyloid precursor proteinR21AG070721 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CHANG, WENHAN, KOH, JAMES · 2021 to 2022
$444k
BLRD Research Career Scientist Award ApplicationIK6BX004835 · VA · VETERANS AFFAIRS MED CTR SAN FRANCISCO · PI Wenhan Chang · 2020 to 2026
–
BCCMA: Foundational Research to Act Upon and Resist Conditions Unfavorable to Bone (FRACTURE CURB): Combined long-acting PTH and calcimimetics actions on skeletal anabolismI01BX005851 · VA · VETERANS AFFAIRS MED CTR SAN FRANCISCO · PI Wenhan Chang · 2022 to 2026
–
BLRD VA I01 BX005851BLRD VA IK6 BX004835NIAMS NIH HHS P30 AR066262NIAMS NIH HHS P30 AR075055NIA NIH HHS R21 AG070721NIA NIH HHS RF1 AG075742NIDDK NIH HHS R01 DK122259NIDDK NIH HHS R01 DK132902NIGMS NIH HHS R01 GM071896NIGMS NIH HHS R35 GM122481NINDS NIH HHS R01 NS122394
6 · The paper itself

Abstract

Positive allosteric modulator (PAM) drugs enhance the activation of the calcium-sensing receptor (CaSR) and suppress parathyroid hormone (PTH) secretion. Unfortunately, these hyperparathyroidism-treating drugs can induce hypocalcemia and arrhythmias. Seeking improved modulators, we docked libraries of 2.7 million and 1.2 billion molecules against the CaSR structure. The billion-molecule docking found PAMs with a 2.7-fold higher hit rate than the million-molecule library, with hits up to 37-fold more potent. Structure-based optimization led to nanomolar leads. In ex vivo organ assays, one of these PAMs was 100-fold more potent than the standard of care, cinacalcet, and reduced serum PTH levels in mice without the hypocalcemia typical of CaSR drugs. As determined from cryo-electron microscopy structures, the PAMs identified here promote CaSR conformations that more closely resemble the activated state than those induced by the established drugs.

Indexed as

Calcimimetic AgentsCryoelectron MicroscopyDrug DiscoveryMolecular Docking SimulationParathyroid HormoneReceptors, Calcium-SensingSmall Molecule LibrariesAllosteric RegulationAnimalsCinacalcetHumansMiceProtein ConformationCalcimimetic AgentsCinacalcetParathyroid HormoneReceptors, Calcium-SensingSmall Molecule Libraries

Identifiers

PMID39298584
PMCPMC11629082

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.