Evidence map›Paper›PMID 39298555›Full record

ArticleGlycobiology2024

Deciphering fucosylated protein-linked O-glycans in oral Tannerella serpentiformis: Insights from NMR spectroscopy and glycoproteomics.

Stephanie Walcher, Fiona F Hager-Mair, Johannes Stadlmann, Hanspeter Kählig, Christina Schäffer

Abstract read
In one paragraph

Article in Glycobiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Stephanie WalcherInstitute of Biochemistry, Department of Chemistry, University of Natural Resources and Life Sciences, Muthgasse 18, Vienna 1190, Austria.
Fiona F Hager-MairInstitute of Biochemistry, Department of Chemistry, University of Natural Resources and Life Sciences, Muthgasse 18, Vienna 1190, Austria.
Johannes StadlmannInstitute of Biochemistry, Department of Chemistry, University of Natural Resources and Life Sciences, Muthgasse 18, Vienna 1190, Austria.
Hanspeter KähligDepartment of Organic Chemistry, Faculty of Chemistry, University of Vienna, Währinger Straβe 38, Vienna 1090, Austria.
Christina SchäfferInstitute of Biochemistry, Department of Chemistry, University of Natural Resources and Life Sciences, Muthgasse 18, Vienna 1190, Austria.ORCID 0000-0003-1613-7258

Funding

Austrian Science Fund FWF P33618Doctoral Programm BioToP W1224Hochschuljubiläumsstiftung der Stadt Wien H85594/2020
6 · The paper itself

Abstract

Tannerella serpentiformis is a health-associated Gram-negative oral anaerobe, while its closest phylogenetic relative is the periodontal pathogen Tannerella forsythia. The pathogen employs glycan mimicry through protein O-glycosylation, displaying a terminal nonulosonic acid aiding in evasion of host immune recognition. Like T. forsythia, T. serpentiformis cells are covered with a 2D-crystalline S-layer composed of two abundant S-layer glycoproteins-TssA and TssB. In this study, we elucidated the structure of the O-linked glycans of T. serpentiformis using 1D and 2D NMR spectroscopy analyzing S-layer glycopeptides and β-eliminated glycans. We found that T. serpentiformis produces two highly fucosylated, branched glycoforms carrying non-carbohydrate modifications, with the structure [2-OMe-Fuc-(α1,2)]-4-OMe-Glc-(β1,3)-[Fuc-(α1,4)]-2-NAc-GlcA-(β1,4)-[3-NH2, 2,4-OMe-Fuc-(α1,3)]-Fuc-(α1,4)-Xyl-(β1,4)-[3-OMe-Fuc-(α1,3)]-GlcA-(α1,2)-[Rha-(α1,4]-Gal, where the 3OMe-Fuc is variable; each glycoform contains a rare 2,4-methoxy, 3-amino-modified fucose. These glycoforms support the hypothesis that nonulosonic acid is a hallmark of pathogenic Tannerella species. A combined glycoproteomics and bioinformatics approach identified multiple sites within TssA (14 sites) and TssB (21 sites) to be O-glycosylated. LC-MS/MS confirmed the presence of the Bacteroidetes O-glycosylation motif (D)(S/T) (L/V/T/A/I) in Tannerella species, including the newly identified candidate "N" for the third position. Alphfold2 models of the S-layer glycoproteins were created revealing an almost uniform spatial distribution of the two glycoforms at the N-terminal two thirds of the proteins supported by glycoproteomics, with glycans facing outward. Glycoproteomics identified 921 unique glycopeptide sequences corresponding to 303 unique UniProt IDs. GO-term enrichment analysis versus the entire T. serpentiformis proteome classified these proteins as mainly membrane and cell periphery-associated glycoproteins, supporting a general protein O-glycosylation system in T. serpentiformis.

Indexed as

FucosePolysaccharidesBacterial ProteinsBacteroidetesGlycosylationHumansMagnetic Resonance SpectroscopyProteomicsBacterial ProteinsFucosePolysaccharidesglycoformsoligosaccharide structureoral microbiomeprotein O-glycosylationS-layer

Identifiers

PMID39298555
PMCPMC11632369

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