Evidence map›Paper›PMID 39298485›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Fructose-2,6-bisphosphate restores DNA repair activity of PNKP and ameliorates neurodegenerative symptoms in Huntington's disease.

Anirban Chakraborty, Sravan Gopalkrishnashetty Sreenivasmurthy, Wyatt Miller, Weihan Huai, Tapan Biswas, Santi Mohan Mandal, Lisardo Boscá, Balaji Krishnan, Gourisankar Ghosh, Tapas Hazra

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Anirban ChakrabortyDepartment of Internal Medicine, University of Texas Medical Branch, Galveston, TX 77555.
Sravan Gopalkrishnashetty SreenivasmurthyDepartment of Neurology, Mitchell Center for Neurodegenerative Diseases, University of Texas Medical Branch, Galveston, TX 77555.
Wyatt MillerDepartment of Chemistry and Biochemistry, University of California San Diego, La Jolla, CA 92093.
Weihan HuaiDepartment of Chemistry and Biochemistry, University of California San Diego, La Jolla, CA 92093.
Tapan BiswasDepartment of Chemistry and Biochemistry, University of California San Diego, La Jolla, CA 92093.ORCID 0000-0002-9460-1813
Santi Mohan MandalDepartment of Internal Medicine, University of Texas Medical Branch, Galveston, TX 77555.
Lisardo BoscáInstituto de Investigaciones Biomédicas Sols-Morreale, (Consejo Superior de Investigaciones Científicas- Universidad Autónoma de Madrid), and Centro de Investigación en Red en Enfermedades Cardiovasculares, Madrid ES-28040, Spain.ORCID 0000-0002-0253-5469
Balaji KrishnanDepartment of Neurology, Mitchell Center for Neurodegenerative Diseases, University of Texas Medical Branch, Galveston, TX 77555.
Gourisankar GhoshDepartment of Chemistry and Biochemistry, University of California San Diego, La Jolla, CA 92093.
Tapas HazraDepartment of Internal Medicine, University of Texas Medical Branch, Galveston, TX 77555.

Funding

Michigan Alzheimer's Disease Core CenterP30AG053760 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LIEBERMAN, ANDREW P · 2016 to 2020
$10.1M
Preferential single-strand break repair in the active genes of mammalian cellsR01NS073976 · NINDS · UNIVERSITY OF TEXAS MED BR GALVESTON · PI HAZRA, TAPAS K · 2012 to 2021
$3.3M
Suppressing Inflammation by Blocking IKK OligomerR01AI163327 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GOURISANKAR GHOSH · 2022 to 2026
$2.6M
Phospholipase D1 Mediated Early Events Affecting Synaptic Dysfunction in Alzheimer's Disease and Related DementiaR01AG063945 · NIA · UNIVERSITY OF TEXAS MED BR GALVESTON · PI KRISHNAN, BALAJI · 2020 to 2024
$2.0M
DNA double strand break repair deficiency and neurodegenerationR56NS073976 · NINDS · UNIVERSITY OF TEXAS MED BR GALVESTON · PI HAZRA, TAPAS K · 2024 to 2024
$536k
Synaptic PLD1 Levels/Signaling is Elevated Through Epigenetic Regulation in the CNS of AD Patients as a Function of Disease Severity and Cognitive DeclineR21AG059223 · NIA · UNIVERSITY OF TEXAS MED BR GALVESTON · PI KRISHNAN, BALAJI · 2018 to 2019
$434k
Chromogranin A is an aging risk factorR21AG078635 · NIA · VETERANS MEDICAL RESEARCH FDN/SAN DIEGO · PI GHOSH, GOURISANKAR, MAHATA, SUSHIL K · 2023 to 2024
$413k
HHS | NIH | National Institute of Neurological Disorders and Stroke (NINDS) 2R01 NS073976HHS | NIH | National Institute of Neurological Disorders and Stroke (NINDS) R56NS073976NIAID NIH HHS R01 AI163327NIA NIH HHS P30 AG053760NIA NIH HHS R01 AG063945NIA NIH HHS R21 AG059223NIA NIH HHS R21 AG078635NINDS NIH HHS R01 NS073976NINDS NIH HHS R56 NS073976
6 · The paper itself

Abstract

Huntington's disease (HD) and spinocerebellar ataxia type 3 (SCA3) are the two most prevalent polyglutamine (polyQ) neurodegenerative diseases, caused by CAG (encoding glutamine) repeat expansion in the coding region of the huntingtin (HTT) and ataxin-3 (ATXN3) proteins, respectively. We have earlier reported that the activity, but not the protein level, of an essential DNA repair enzyme, polynucleotide kinase 3'-phosphatase (PNKP), is severely abrogated in both HD and SCA3 resulting in accumulation of double-strand breaks in patients' brain genome. While investigating the mechanistic basis for the loss of PNKP activity and accumulation of DNA double-strand breaks leading to neuronal death, we observed that PNKP interacts with the nuclear isoform of 6-phosphofructo-2-kinase fructose-2,6-bisphosphatase 3 (PFKFB3). Depletion of PFKFB3 markedly abrogates PNKP activity without changing its protein level. Notably, the levels of both PFKFB3 and its product fructose-2,6 bisphosphate (F2,6BP), an allosteric modulator of glycolysis, are significantly lower in the nuclear extracts of postmortem brain tissues of HD and SCA3 patients. Supplementation of F2,6BP restored PNKP activity in the nuclear extracts of patients' brain. Moreover, intracellular delivery of F2,6BP restored both the activity of PNKP and the integrity of transcribed genome in neuronal cells derived from the striatum of the HD mouse. Importantly, supplementing F2,6BP rescued the HD phenotype in Drosophila, suggesting F2,6BP to serve in vivo as a cofactor for the proper functionality of PNKP and thereby, of brain health. Our results thus provide a compelling rationale for exploring the therapeutic use of F2,6BP and structurally related compounds for treating polyQ diseases.

Indexed as

DNA RepairDNA Repair EnzymesFructosediphosphatesHuntington DiseaseAnimalsDisease Models, AnimalDNA Breaks, Double-StrandedDrosophilaDrosophila melanogasterHumansMiceNeuronsPhosphofructokinase-2Phosphotransferases (Alcohol Group Acceptor)Phosphotransferases (Phosphate Group Acceptor)DNA Repair Enzymesfructose 2,6-diphosphateFructosediphosphatesPhosphofructokinase-2Phosphotransferases (Alcohol Group Acceptor)Phosphotransferases (Phosphate Group Acceptor)PNKP protein, humanPnkp protein, mouseDNA double-strand break repairfructose-2,6-bisphosphateHuntington’s diseasePNKPspinocerebellar ataxia type 3

Identifiers

PMID39298485
PMCPMC11441552

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.