Evidence map›Paper›PMID 39298475›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Oligomerization-driven avidity correlates with SARS-CoV-2 cellular binding and inhibition.

Roi Asor, Anna Olerinyova, Sean A Burnap, Manish S Kushwah, Fabian Soltermann, Lucas S P Rudden, Mario Hensen, Snežana Vasiljevic, Juliane Brun, Michelle Hill and 12 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Switching Spike Plasticity Shapes ACE2 Engagement Across SARS-CoV-2 Variants.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  3. Review
  4. Review
  5. Article
  6. NIPBL and STAG1 enable loop extrusion by providing differential DNA-cohesin affinity.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. Article
  8. Oligomerization-driven avidity correlates with SARS-CoV-2 cellular binding and inhibition.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Roi AsorPhysical and Theoretical Chemistry, Department of Chemistry, University of Oxford, Oxford OX1 3QZ, United Kingdom.ORCID 0000-0002-5206-4378
Anna OlerinyovaPhysical and Theoretical Chemistry, Department of Chemistry, University of Oxford, Oxford OX1 3QZ, United Kingdom.
Sean A BurnapThe Kavli Institute for Nanoscience Discovery, Dorothy Crowfoot Hodgkin Building, University of Oxford, Oxford OX1 3QU, United Kingdom.ORCID 0000-0002-3408-8608
Manish S KushwahPhysical and Theoretical Chemistry, Department of Chemistry, University of Oxford, Oxford OX1 3QZ, United Kingdom.
Fabian SoltermannPhysical and Theoretical Chemistry, Department of Chemistry, University of Oxford, Oxford OX1 3QZ, United Kingdom.ORCID 0000-0002-8616-9346
Lucas S P RuddenDepartment of Physics, Durham University, Durham DH1 3LE, United Kingdom.ORCID 0000-0002-4753-8890
Mario HensenThe Kavli Institute for Nanoscience Discovery, Dorothy Crowfoot Hodgkin Building, University of Oxford, Oxford OX1 3QU, United Kingdom.ORCID 0000-0002-2200-5975
Snežana VasiljevicThe Kavli Institute for Nanoscience Discovery, Dorothy Crowfoot Hodgkin Building, University of Oxford, Oxford OX1 3QU, United Kingdom.
Juliane BrunThe Kavli Institute for Nanoscience Discovery, Dorothy Crowfoot Hodgkin Building, University of Oxford, Oxford OX1 3QU, United Kingdom.
Michelle HillThe Kavli Institute for Nanoscience Discovery, Dorothy Crowfoot Hodgkin Building, University of Oxford, Oxford OX1 3QU, United Kingdom.ORCID 0000-0002-9289-5811
Liu ChangWellcome Centre for Human Genetics, Nuffield Department of Medicine, University of Oxford, Oxford OX3 7BN, United Kingdom.
Wanwisa DejnirattisaiWellcome Centre for Human Genetics, Nuffield Department of Medicine, University of Oxford, Oxford OX3 7BN, United Kingdom.
Piyada SupasaWellcome Centre for Human Genetics, Nuffield Department of Medicine, University of Oxford, Oxford OX3 7BN, United Kingdom.
Juthathip MongkolsapayaWellcome Centre for Human Genetics, Nuffield Department of Medicine, University of Oxford, Oxford OX3 7BN, United Kingdom.
Daming ZhouDivision of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Oxford OX3 7BN, United Kingdom.
David I StuartDivision of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Oxford OX3 7BN, United Kingdom.
Gavin R ScreatonWellcome Centre for Human Genetics, Nuffield Department of Medicine, University of Oxford, Oxford OX3 7BN, United Kingdom.
Matteo T DegiacomiDepartment of Physics, Durham University, Durham DH1 3LE, United Kingdom.ORCID 0000-0003-4672-471X
Nicole ZitzmannThe Kavli Institute for Nanoscience Discovery, Dorothy Crowfoot Hodgkin Building, University of Oxford, Oxford OX1 3QU, United Kingdom.ORCID 0000-0003-1969-4949
Justin L P BeneschPhysical and Theoretical Chemistry, Department of Chemistry, University of Oxford, Oxford OX1 3QZ, United Kingdom.
Weston B StruweThe Kavli Institute for Nanoscience Discovery, Dorothy Crowfoot Hodgkin Building, University of Oxford, Oxford OX1 3QU, United Kingdom.ORCID 0000-0003-0594-226X
Philipp KukuraPhysical and Theoretical Chemistry, Department of Chemistry, University of Oxford, Oxford OX1 3QZ, United Kingdom.

Funding

EC | European Research Council (ERC) PHOTOMASS 819593European Molecular Biology Organization (EMBO) ALTF 198-2020NIH Research Biomedical Research Centre Funding Scheme Fast Grants Mercatus CenterOak Foundation (Oak Foundation USA)Oxford Glycobiology EndowmentSchmidt Futures, and Red Avenue FoundationThe Chinese Academy of Medical Sciences Innovation Fund for Medical Science 2018- I2M-2-002UKRI | Biotechnology and Biological Sciences Research Council (BBSRC) BB/V011456/1UKRI | Engineering and Physical Sciences Research Council (EPSRC) EP/T03419X/1UKRI Future Leaders Fellowship MR/V02213X/1UKRI | Medical Research Council (MRC) MR/N00065X/1University of Oxford's COVID-19 Research Response FundWellcome TrustWellcome Trust Centre for Human Genetics 090532/Z/09/ZWellcome Trust PhD Programme 203853/Z/16/ZWellcome Trust (WT) SEACOVARIANTS consortium 226120/Z/22/Z
6 · The paper itself

Abstract

Cellular processes are controlled by the thermodynamics of the underlying biomolecular interactions. Frequently, structural investigations use one monomeric binding partner, while ensemble measurements of binding affinities generally yield one affinity representative of a 1:1 interaction, despite the majority of the proteome consisting of oligomeric proteins. For example, viral entry and inhibition in SARS-CoV-2 involve a trimeric spike surface protein, a dimeric angiotensin-converting enzyme 2 (ACE2) cell-surface receptor and dimeric antibodies. Here, we reveal that cooperativity correlates with infectivity and inhibition as opposed to 1:1 binding strength. We show that ACE2 oligomerizes spike more strongly for more infectious variants, while exhibiting weaker 1:1 affinity. Furthermore, we find that antibodies use induced oligomerization both as a primary inhibition mechanism and to enhance the effects of receptor-site blocking. Our results suggest that naive affinity measurements are poor predictors of potency, and introduce an antibody-based inhibition mechanism for oligomeric targets. More generally, they point toward a much broader role of induced oligomerization in controlling biomolecular interactions.

Indexed as

Angiotensin-Converting Enzyme 2COVID-19Protein BindingProtein MultimerizationSARS-CoV-2Spike Glycoprotein, CoronavirusAntibodies, ViralHumansThermodynamicsVirus InternalizationACE2 protein, humanAngiotensin-Converting Enzyme 2Antibodies, ViralSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2avidity-based neutralization potencylabel-free single-molecule trackingmass photometryreceptor oligomerizationSARS-CoV-2

Identifiers

PMID39298475
PMCPMC11459207

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.