Evidence map›Paper›PMID 39298104›Full record

ArticleMolecular biotechnology2025

Evaluation of Differentially Expressed Candidate Genes in Benzo[a]pyrene Degradation by Burkholderia vietnamiensis G4.

Marcela Marmitt, Guilherme Pinto Cauduro, Renan César Sbruzzi, Victor Hugo Valiati

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Article in Molecular biotechnology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Marcela MarmittLaboratory of Genetics and Molecular Biology, University of Vale Do Rio Dos Sinos, São Leopoldo, Rio Grande Do Sul, Brazil.
Guilherme Pinto CauduroLaboratory of Genetics and Molecular Biology, University of Vale Do Rio Dos Sinos, São Leopoldo, Rio Grande Do Sul, Brazil.
Renan César SbruzziLaboratory of Genetics and Molecular Biology, University of Vale Do Rio Dos Sinos, São Leopoldo, Rio Grande Do Sul, Brazil.
Victor Hugo ValiatiLaboratory of Genetics and Molecular Biology, University of Vale Do Rio Dos Sinos, São Leopoldo, Rio Grande Do Sul, Brazil. valiati@unisinos.br.ORCID http://orcid.org/0000-0002-4467-4547

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacteria-mediated bioremediation is widely employed for its environmental benefits. The genus Burkholderia can degrade persistent organic compounds, however, little is known about its mechanisms. To increase this knowledge, Burkholderia vietnamiensis G4 bacteria were exposed to benzo[a]pyrene, a recalcitrant compound, and the expression of twelve genes of interest was analyzed at 1, 12 and 24 h. In addition, benzo[a]pyrene degradation, evaluation of cell viability and fluorescence emission of assimilated benzo[a]pyrene was performed over 28 days. The up-regulated genes were xre, paaE, livG and pckA at the three times, ACAD, atoB, bmoA and proV at 1 h and AstB at 12 h. These genes are important for bacterial survival in stress situations, breakdown and metabolization of organic compounds, and nutrient transport and uptake. Furthermore, a 52% reduction of the pollutant was observed, there was no significant variation in the viability rate of the cells, and fluorescence indicated an accumulation of benzo[a]pyrene after 24 h. Our study demonstrates the bacteria adaptability and ability to modulate the expression of genes at different times and as needed. This increases our understanding of biodegradation processes and opens new possibilities for using this bacterial strain as a tool for the bioremediation of contaminated areas.

Indexed as

Benzo(a)pyreneBurkholderiaGene Expression Regulation, BacterialBacterial ProteinsBiodegradation, EnvironmentalGenes, BacterialBacterial ProteinsBenzo(a)pyreneAdaptation mechanismsBioremediationMetabolic pathwaysPAHRT-qPCR

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.