Evidence map›Paper›PMID 39294800›Full record

ArticleEnvironmental microbiome2024

New fungal primers reveal the diversity of Mucoromycotinian arbuscular mycorrhizal fungi and their response to nitrogen application.

Mirjam Seeliger, Sally Hilton, George Muscatt, Christopher Walker, David Bass, Felipe Albornoz, Rachel J Standish, Neil D Gray, Louis Mercy, Leonidas Rempelos and 4 more

Abstract read
In one paragraph

Article in Environmental microbiome, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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  8. Mycoscience · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Mirjam SeeligerSchool of Natural and Environmental Sciences, Newcastle University, Newcastle upon Tyne, NE1 7RU, UK. mseeliger@lms-beratung.de.
Sally HiltonSchool of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK.
George MuscattSchool of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK.
Christopher WalkerRoyal Botanic Gardens Edinburgh, 21A Inverleith Row, Edinburgh, EH3 5LR, UK.
David BassCentre for Environment, Fisheries, and Aquaculture Science, Barrack Road, The Nothe, Weymouth, DT4 8UB, UK.
Felipe AlbornozUWA School of Agriculture and Environment, University of Western Australia, Crawley, WA, 6009, Australia.
Rachel J StandishSchool of Environmental and Conservation Sciences, Murdoch University, South Street, Murdoch, WA, 6150, Australia.
Neil D GraySchool of Natural and Environmental Sciences, Newcastle University, Newcastle upon Tyne, NE1 7RU, UK.
Louis MercyINOQ Gmbh, 29465, Schnega, Germany.
Leonidas RempelosSchool of Natural and Environmental Sciences, Newcastle University, Newcastle upon Tyne, NE1 7RU, UK.
Carolin SchneiderINOQ Gmbh, 29465, Schnega, Germany.
Megan H RyanUWA School of Agriculture and Environment, University of Western Australia, Crawley, WA, 6009, Australia.
Paul E BilsborrowSchool of Natural and Environmental Sciences, Newcastle University, Newcastle upon Tyne, NE1 7RU, UK.
Gary D BendingSchool of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK. gary.bending@warwick.ac.uk.

Funding

European Commission 722642Natural Environment Research Council NE/S010270/1
6 · The paper itself

Abstract

backgroundArbuscular mycorrhizas (AM) are the most widespread terrestrial symbiosis and are both a key determinant of plant health and a major contributor to ecosystem processes through their role in biogeochemical cycling. Until recently, it was assumed that the fungi which form AM comprise the subphylum Glomeromycotina (G-AMF), and our understanding of the diversity and ecosystem roles of AM is based almost exclusively on this group. However recent evidence shows that fungi which form the distinctive 'fine root endophyte' (FRE) AM morphotype are members of the subphylum Mucoromycotina (M-AMF), so that AM symbioses are actually formed by two distinct groups of fungi.

resultsWe investigated the influence of nitrogen (N) addition and wheat variety on the assembly of AM communities under field conditions. Visual assessment of roots showed co-occurrence of G-AMF and M-AMF, providing an opportunity to compare the responses of these two groups. Existing 'AM' 18S rRNA primers which co-amplify G-AMF and M-AMF were modified to reduce bias against Mucoromycotina, and compared against a new 'FRE' primer set which selectively amplifies Mucoromycotina. Using the AM-primers, no significant effect of either N-addition or wheat variety on G-AMF or M-AMF diversity or community composition was detected. In contrast, using the FRE-primers, N-addition was shown to reduce M-AMF diversity and altered community composition. The ASV which responded to N-addition were closely related, demonstrating a clear phylogenetic signal which was identified only by the new FRE-primers. The most abundant Mucoromycotina sequences we detected belonged to the same Endogonales clades as dominant sequences associated with FRE morphology in Australia, indicating that closely related M-AMF may be globally distributed.

conclusionsThe results demonstrate the need to consider both G-AMF and M-AMF when investigating AM communities, and highlight the importance of primer choice when investigating AMF community dynamics.

Indexed as

Arbuscular mycorrhizasFine root endophytesMucoromycotinaNitrogen

Identifiers

PMID39294800
PMCPMC11411812

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.