Evidence map›Paper›PMID 39294587›Full record

ArticleBMC microbiology2024

Genetic diversity, biofilm formation, and Vancomycin resistance of clinical Clostridium innocuum isolates.

Chuan Chiang-Ni, Jing-Yi Huang, Chih-Yun Hsu, Yi-Chi Lo, Yi-Ywan M Chen, Chih-Ho Lai, Cheng-Hsun Chiu

Abstract read
In one paragraph

Article in BMC microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Co-Colonization of Non-Antibiotics (Basel, Switzerland) · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Chuan Chiang-NiDepartment of Microbiology and Immunology, College of Medicine, Chang Gung University, No. 259 Wen-Hwa 1st Road, Kwei-Shan, Taoyuan, 333323, Taiwan. entchuan@gap.cgu.edu.tw.
Jing-Yi HuangGraduate Institute of Biomedical Sciences, College of Medicine, Chang Gung University, Taoyuan, Taiwan.
Chih-Yun HsuDepartment of Microbiology and Immunology, College of Medicine, Chang Gung University, No. 259 Wen-Hwa 1st Road, Kwei-Shan, Taoyuan, 333323, Taiwan.
Yi-Chi LoDepartment of Biomedical Sciences, College of Medicine, Chang Gung University, Taoyuan, Taiwan.
Yi-Ywan M ChenDepartment of Microbiology and Immunology, College of Medicine, Chang Gung University, No. 259 Wen-Hwa 1st Road, Kwei-Shan, Taoyuan, 333323, Taiwan.
Chih-Ho LaiDepartment of Microbiology and Immunology, College of Medicine, Chang Gung University, No. 259 Wen-Hwa 1st Road, Kwei-Shan, Taoyuan, 333323, Taiwan.
Cheng-Hsun ChiuGraduate Institute of Biomedical Sciences, College of Medicine, Chang Gung University, Taoyuan, Taiwan.

Funding

Chang Gung Memorial Hospital, Linkou CORPD1M0012National Science and Technology Council 112-2628-B-182-004
6 · The paper itself

Abstract

backgroundClostridium innocuum, previously considered a commensal microbe, is a spore-forming anaerobic bacterium. C. innocuum displays inherent resistance to vancomycin and is associated with extra-intestinal infections, antibiotic-associated diarrhea, and inflammatory bowel disease. This study seeks to establish a multilocus sequence typing (MLST) scheme to explore the correlation between C. innocuum genotyping and its potential pathogenic phenotypes.

methodsFifty-two C. innocuum isolates from Linkou Chang Gung Memorial Hospital (CGMH) in Taiwan and 60 sequence-available C. innocuum isolates from the National Center for Biotechnolgy Information Genome Database were included. The concentrated sequence of housekeeping genes in C. innocuum was determined by amplicon sequencing and used for MLST and phylogenetic analyses. The biofilm production activity of the C. innocuum isolates was determined by crystal violet staining.

resultsOf the 112 C. innocuum isolates, 58 sequence types were identified. Maximum likelihood estimation categorized 52 CGMH isolates into two phylogenetic clades. These isolates were found to be biofilm producers, with isolates in clade I exhibiting significantly higher biofilm production than isolates in clade II. The sub-inhibitory concentration of vancomycin seemed to minimally influence biofilm production by C. innocuum isolates. Nevertheless, C. innocuum embedded in the biofilm structure demonstrated resistance to vancomycin treatments at a concentration greater than 256 µg/mL.

conclusionsThis study suggests that a specific genetic clade of C. innocuum produces a substantial amount of biofilm. Furthermore, this phenotype assists C. innocuum in resisting high concentrations of vancomycin, which may potentially play undefined roles in C. innocuum pathogenesis.

Indexed as

Anti-Bacterial AgentsBiofilmsClostridiumClostridium InfectionsGenetic VariationMicrobial Sensitivity TestsMultilocus Sequence TypingPhylogenyVancomycinVancomycin ResistanceGenes, EssentialGenotypeHumansTaiwanAnti-Bacterial AgentsVancomycinBiofilmClostridium innocuumMLSTVancomycin

Identifiers

PMID39294587
PMCPMC11409672

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.