Evidence map›Paper›PMID 39294565›Full record

ArticleBMC genomics2024

Transcriptomic analysis reveals molecular insights into lactation dynamics in Jakhrana goat mammary gland.

Mahesh Shivanand Dige, Ankita Gurao, Lalit Pratap Singh, Meenakshi Chitkara, Manoj Kumar Singh, Gopal Dass, Arun Kumar Verma, Rakesh Kumar Pundir, Ranjit Singh Kataria

Abstract read
In one paragraph

Article in BMC genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Review
  4. Genomic advancements in goat breeding: enhancing productivity, disease resistance, and sustainability in India's rural economy.Mammalian genome : official journal of the International Mammalian Genome Society · 2025
    Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Mahesh Shivanand DigeDivision of Animal Genetic Resources, ICAR- National Bureau of Animal Genetic Resources, Karnal, Haryana, 132001, India. maheshdige@gmail.com.ORCID http://orcid.org/0000-0002-6588-6311
Ankita GuraoDivision of Animal Genetic Resources, ICAR- National Bureau of Animal Genetic Resources, Karnal, Haryana, 132001, India.ORCID http://orcid.org/0000-0002-1992-2406
Lalit Pratap SinghDivision of Animal Genetic Resources, ICAR- National Bureau of Animal Genetic Resources, Karnal, Haryana, 132001, India.
Meenakshi ChitkaraDivision of Animal Genetic Resources, ICAR- National Bureau of Animal Genetic Resources, Karnal, Haryana, 132001, India.ORCID http://orcid.org/0000-0003-2175-8737
Manoj Kumar SinghDivision of Animal Genetics and Breeding, ICAR - Central Institute for Research on Goats, Makhdoom, Uttar Pradesh, India.
Gopal DassDivision of Animal Genetics and Breeding, ICAR - Central Institute for Research on Goats, Makhdoom, Uttar Pradesh, India.
Arun Kumar VermaDivision of Animal Genetics and Breeding, ICAR - Central Institute for Research on Goats, Makhdoom, Uttar Pradesh, India.
Rakesh Kumar PundirDivision of Animal Genetic Resources, ICAR- National Bureau of Animal Genetic Resources, Karnal, Haryana, 132001, India.ORCID http://orcid.org/0000-0001-6787-9409
Ranjit Singh KatariaDivision of Animal Genetic Resources, ICAR- National Bureau of Animal Genetic Resources, Karnal, Haryana, 132001, India.ORCID http://orcid.org/0000-0003-2845-7486

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundGoat milk is gaining popularity as a superior alternative to bovine milk due to its closer resemblance to human milk. Understanding the molecular processes underlying lactation is crucial for improving milk quality and production in goats. However, the genetic mechanisms governing lactation in goats, particularly in indigenous breeds like the Jakhrana, remain largely unexplored.

resultsIn this study, we performed a comprehensive transcriptomic analysis of Jakhrana goat mammary glands during early and late lactation stages. We isolated milk somatic cells and conducted RNA sequencing, followed by transcript quantification and mapping against the ARS1.2 Capra hircus reference assembly. Our analysis identified differentially expressed genes (DEGs) and commonly expressed genes (CEGs) across the lactation phases. Early lactation showed enrichment of genes encoding antimicrobial peptides and lubrication proteins, while late lactation exhibited heightened expression of genes encoding major milk proteins. Additionally, DEG analysis revealed upregulation of pivotal genes, such as the ABC transporter gene MRP4, implicated in modulating milk composition and quality.

conclusionOur findings provide insights into the genetic mechanisms underlying lactation dynamics in the Jakhrana goat. Understanding these mechanisms could help in improving milk production and quality in goats, benefiting both the dairy industry and consumers.

Indexed as

Gene Expression ProfilingGoatsLactationMammary Glands, AnimalAnimalsFemaleMilkMilk ProteinsTranscriptomeMilk ProteinsGoat milkLactationMammary glandsTranscriptomic

Identifiers

PMID39294565
PMCPMC11409665

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LicenceCC BY-NC-ND
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.