Evidence map›Paper›PMID 39292703›Full record

ArticlePLoS pathogens2024

Isolation and characterization of IgG3 glycan-targeting antibodies with exceptional cross-reactivity for diverse viral families.

Matthew J Vukovich, Andrea R Shiakolas, Jared Lindenberger, Robert A Richardson, Lindsay E Bass, Maggie Barr, Yanshun Liu, Eden P Go, Chan Soo Park, Aaron J May and 24 more

Abstract read
In one paragraph

Article in PLoS pathogens, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Canonical Antibodies Adopt Distinct Binding Modes to Recognize Viral Glycan Shields.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

34 authors.

Matthew J VukovichVanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, Tennessee, United States of America.ORCID 0000-0002-7110-9623
Andrea R ShiakolasVanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, Tennessee, United States of America.
Jared LindenbergerDuke Human Vaccine Institute, Durham, North Carolina, United States of America.
Robert A RichardsonFlorida Research and Innovation Center, Cleveland Clinic, Port Saint Lucie, Florida, United States of America.
Lindsay E BassDepartment of Pathology, Microbiology and Immunology, Vanderbilt University Medical Center, Nashville, Tennessee, United States of America.
Maggie BarrDuke Human Vaccine Institute, Durham, North Carolina, United States of America.
Yanshun LiuDuke Human Vaccine Institute, Durham, North Carolina, United States of America.
Eden P GoDepartment of Chemistry, University of Kansas, Lawrence, Kansas, United States of America.
Chan Soo ParkDuke Human Vaccine Institute, Durham, North Carolina, United States of America.
Aaron J MayDuke Human Vaccine Institute, Durham, North Carolina, United States of America.
Salam SammourDuke Human Vaccine Institute, Durham, North Carolina, United States of America.
Chipo KambaramiDuke Human Vaccine Institute, Durham, North Carolina, United States of America.
Xiao HuangDuke Human Vaccine Institute, Durham, North Carolina, United States of America.
Katarzyna JanowskaDuke Human Vaccine Institute, Durham, North Carolina, United States of America.
Robert J EdwardsDuke Human Vaccine Institute, Durham, North Carolina, United States of America.
Katayoun MansouriDuke Human Vaccine Institute, Durham, North Carolina, United States of America.
Taylor N SpenceDuke Human Vaccine Institute, Durham, North Carolina, United States of America.
Alexandra A Abu-ShmaisVanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, Tennessee, United States of America.
Nelia P ManamelaMRC Antibody Immunity Research Unit, School of Pathology, University of the Witwatersrand, Johannesburg, South Africa.
Simone I RichardsonMRC Antibody Immunity Research Unit, School of Pathology, University of the Witwatersrand, Johannesburg, South Africa.
Sabina E W LeonardVanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, Tennessee, United States of America.
Kathryn R GripenstrawVanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, Tennessee, United States of America.
Ian SetliffVanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, Tennessee, United States of America.
Kevin O SaundersDuke Human Vaccine Institute, Durham, North Carolina, United States of America.
Rachel H BonamiDepartment of Pathology, Microbiology and Immunology, Vanderbilt University Medical Center, Nashville, Tennessee, United States of America.
Ted M RossFlorida Research and Innovation Center, Cleveland Clinic, Port Saint Lucie, Florida, United States of America.
Heather DesaireDepartment of Chemistry, University of Kansas, Lawrence, Kansas, United States of America.
Penny L MooreMRC Antibody Immunity Research Unit, School of Pathology, University of the Witwatersrand, Johannesburg, South Africa.
Robert ParksDuke Human Vaccine Institute, Durham, North Carolina, United States of America.
Barton F HaynesDuke Human Vaccine Institute, Durham, North Carolina, United States of America.
Daniel J ShewardDepartment of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Stockholm, Sweden.
Priyamvada AcharyaDuke Human Vaccine Institute, Durham, North Carolina, United States of America.
Giuseppe A SauttoFlorida Research and Innovation Center, Cleveland Clinic, Port Saint Lucie, Florida, United States of America.
Ivelin S GeorgievVanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, Tennessee, United States of America.ORCID 0000-0002-6312-7696

Funding

Virus and Antibody Gene Sequencing CoreP01AI131251 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI Kevin Wiehe · 2017 to 2026
$40.7M
Project 3 - Dynamics of latent HIV-1 reservoirs: High resolution antigenic mapping and strategies to block reboundU54AI170752 · NIAID · DUKE UNIVERSITY · PI Priyamvada Acharya · 2022 to 2026
$32.0M
Interdisciplinary Training in Rheumatic DiseasesT32AR059039 · NIAMS · VANDERBILT UNIVERSITY · PI Tracy Minan Frech, AMY S MAJOR · 2010 to 2026
$4.3M
Chemical Biology of Infectious Diseases (CBID) Training ProgramT32AI112541 · NIAID · VANDERBILT UNIVERSITY · PI Eric P Skaar · 2015 to 2026
$4.0M
Effect of natural and engineered variations on structure and biophysics of SARS-CoV-2 spikeR01AI165947 · NIAID · DUKE UNIVERSITY · PI Priyamvada Acharya, Rory Henderson · 2022 to 2026
$3.8M
High-throughput mapping of antigen specificity to B-cell-receptor sequence for characterizing antibody responses in HIV-vaccinated and infected individualsR01AI152693 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI GEORGIEV, IVELIN · 2020 to 2023
$3.4M
Structural characterization of Fab-dimerized glycan-reactive antibodies that neutralize HIV-1R01AI165147 · NIAID · DUKE UNIVERSITY · PI ACHARYA, PRIYAMVADA, WILLIAMS, WILTON B · 2021 to 2025
$3.4M
Technologies for High-Throughput Mapping of Antigen Specificity to B-Cell-Receptor SequenceR01AI175245 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Ivelin Georgiev · 2023 to 2026
$3.4M
The Origins of Human Anti-Insulin B Lymphocytes in Type 1 DiabetesR01DK131070 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Rachel H Bonami · 2022 to 2026
$2.2M
An Eiger2 XE 9M detector for the NYSBC-operated NYX beamline at NSLS-IIS10OD030394 · OD · NEW YORK STRUCTURAL BIOLOGY CENTER · PI BATTAILE, KEVIN P · 2021 to 2021
$1.8M
NIAID NIH HHS P01 AI131251NIAID NIH HHS R01 AI152693NIAID NIH HHS R01 AI165147NIAID NIH HHS R01 AI165947NIAID NIH HHS R01 AI175245NIAID NIH HHS T32 AI112541NIAID NIH HHS U54 AI170752NIAMS NIH HHS T32 AR059039NIDDK NIH HHS R01 DK131070NIH HHS S10 OD030394
6 · The paper itself

Abstract

Broadly reactive antibodies that target sequence-diverse antigens are of interest for vaccine design and monoclonal antibody therapeutic development because they can protect against multiple strains of a virus and provide a barrier to evolution of escape mutants. Using LIBRA-seq (linking B cell receptor to antigen specificity through sequencing) data for the B cell repertoire of an individual chronically infected with human immunodeficiency virus type 1 (HIV-1), we identified a lineage of IgG3 antibodies predicted to bind to HIV-1 Envelope (Env) and influenza A Hemagglutinin (HA). Two lineage members, antibodies 2526 and 546, were confirmed to bind to a large panel of diverse antigens, including several strains of HIV-1 Env, influenza HA, coronavirus (CoV) spike, hepatitis C virus (HCV) E protein, Nipah virus (NiV) F protein, and Langya virus (LayV) F protein. We found that both antibodies bind to complex glycans on the antigenic surfaces. Antibody 2526 targets the stem region of influenza HA and the N-terminal domain (NTD) region of SARS-CoV-2 spike. A crystal structure of 2526 Fab bound to mannose revealed the presence of a glycan-binding pocket on the light chain. Antibody 2526 cross-reacted with antigens from multiple pathogens and displayed no signs of autoreactivity. These features distinguish antibody 2526 from previously described glycan-reactive antibodies. Further study of this antibody class may aid in the selection and engineering of broadly reactive antibody therapeutics and can inform the development of effective vaccines with exceptional breadth of pathogen coverage.

Indexed as

Antibodies, ViralCross ReactionsImmunoglobulin GPolysaccharidesAntibodies, MonoclonalCOVID-19Hemagglutinin Glycoproteins, Influenza VirusHIV-1HIV InfectionsHumansSARS-CoV-2Spike Glycoprotein, CoronavirusAntibodies, MonoclonalAntibodies, ViralHemagglutinin Glycoproteins, Influenza VirusImmunoglobulin GPolysaccharidesSpike Glycoprotein, Coronavirus

Identifiers

PMID39292703
PMCPMC11410209

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.