Evidence map›Paper›PMID 39291081›Full record

ArticleJournal of inflammation research2024

Unveiling and Validating the Role of Fatty Acid Metabolism in Ulcerative Colitis.

Beiying Deng, Junhai Zhen, Zixuan Xiang, Xiangyun Li, Cheng Tan, Ying Chen, Pengzhan He, Jingjing Ma, Weiguo Dong

Abstract read
In one paragraph

Article in Journal of inflammation research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Beiying Deng *Department of Gastroenterology, Renmin Hospital of Wuhan University, Wuhan, People's Republic of China.
Junhai Zhen *Department of General Practice, Renmin Hospital of Wuhan University, Wuhan, People's Republic of China.
Zixuan Xiang *Department of Gastroenterology, Renmin Hospital of Wuhan University, Wuhan, People's Republic of China.
Xiangyun LiDepartment of Gastroenterology, Renmin Hospital of Wuhan University, Wuhan, People's Republic of China.ORCID 0009-0005-7499-5041
Cheng TanDepartment of Gastroenterology, Renmin Hospital of Wuhan University, Wuhan, People's Republic of China.
Ying ChenDepartment of Gastroenterology, Renmin Hospital of Wuhan University, Wuhan, People's Republic of China.
Pengzhan HeDepartment of Gastroenterology, Renmin Hospital of Wuhan University, Wuhan, People's Republic of China.
Jingjing MaDepartment of Geriatric, Renmin Hospital of Wuhan University, Wuhan, People's Republic of China.
Weiguo Dong *Department of Gastroenterology, Renmin Hospital of Wuhan University, Wuhan, People's Republic of China.ORCID 0000-0002-4228-6508

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Ulcerative colitis (UC) is a debilitating intestinal disorder that imposes a significant burden on those affected. Fatty acid metabolism plays a pivotal role in regulating immune cell function and maintaining internal homeostasis. This study investigates the biological and clinical significance of fatty acid metabolism within the context of UC. Methods: Gene expression profiles from patients with UC and healthy controls were retrieved, enabling the identification of differentially expressed genes (DEGs) specific to UC. These DEGs were then intersected with genes related to fatty acid metabolism, resulting in the identification of differentially expressed fatty acid metabolism-related genes (FAM-DEGs). Machine learning was employed to pinpoint key feature genes from the FAM-DEGs, which were subsequently used to construct a predictive UC model and to uncover molecular subtypes associated with fatty acid metabolism in UC. An animal model of UC was established using 3% dextran sulfate sodium (DSS) administration. Western blot analysis confirmed the expression levels of genes in intestinal tissues. Results: The machine learning analysis identified three pivotal genes-ACAT1, ACOX2, and HADHB-culminating in a highly predictive nomogram. Consensus cluster analysis further categorized 637 UC samples into two distinct subgroups. The molecular subtypes related to fatty acid metabolism in UC exhibited significant differences in gene expression, biological activities, and enrichment pathways. Immune infiltration analysis highlighted elevated expression of two genes (excluding HADHB) in subtype 1, which corresponded with a marked increase in immune cell infiltration within this subtype. Western blot analysis demonstrated that ACAT1, ACOX2, and HADHB expression levels in the DSS group were significantly reduced, paralleling those observed in the normal group. Conclusion: This study highlights the critical role of specific fatty acid metabolism-related genes in UC, emphasizing their potential as targets for therapeutic intervention and shedding light on the underlying mechanisms of UC progression.

Indexed as

biomarkersfatty acid metabolismimmune infiltrationsmachine learningpharmacologyulcerative colitis

Identifiers

PMID39291081
PMCPMC11407323

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.