Evidence map›Paper›PMID 39289639›Full record

ArticleBMC microbiology2024

EsxA, a type VII secretion system-dependent effector, reveals a novel function in the sporulation of Bacillus cereus ATCC14579.

Harvey K Kamboyi, Atmika Paudel, Misheck Shawa, Misa Sugawara, Tuvshinzaya Zorigt, Joseph Y Chizimu, Tomoe Kitao, Yoshikazu Furuta, Bernard M Hang'ombe, Musso Munyeme and 1 more

Abstract read
In one paragraph

Article in BMC microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Harvey K KamboyiDivision of Infection and Immunity, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Japan.
Atmika PaudelDivision of Infection and Immunity, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Japan.
Misheck ShawaDivision of Infection and Immunity, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Japan.
Misa SugawaraDivision of Infection and Immunity, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Japan.
Tuvshinzaya ZorigtDivision of Infection and Immunity, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Japan.
Joseph Y ChizimuInternational Collaboration Unit, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Japan.
Tomoe KitaoDivision of Infection and Immunity, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Japan.
Yoshikazu FurutaDivision of Infection and Immunity, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Japan.
Bernard M Hang'ombeMicrobiology Unit, Paraclinical Studies, School of Veterinary Medicine, University of Zambia, Lusaka, Zambia.
Musso MunyemePublic Health Unit, Disease Control Studies, School of Veterinary Medicine, University of Zambia, Lusaka, Zambia.
Hideaki HigashiDivision of Infection and Immunity, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Japan. hidea-hi@czc.hokudai.ac.jp.

Funding

Japan or Japan Society for the Promotion of Science under Grants-in-Aid for Scientific Research 19K16653Japan Society for the Promotion of Science under Grants-in-Aid for Scientific Research 17H01679Japan Society for the Promotion of Science under Grants-in-Aid for Scientific Research 21K15430
6 · The paper itself

Abstract

backgroundBacillus cereus is a Gram-positive, spore-forming bacterium that produces a spectrum of effectors integral to bacterial niche adaptation and the development of various infections. Among those is EsxA, whose secretion depends on the EssC component of the type VII secretion system (T7SS). EsxA's roles within the bacterial cell are poorly understood, although postulations indicate that it may be involved in sporulation. However, the T7SS repertoire in B. cereus has not been reported, and its functions are unestablished.

methodsWe used the type strain, B. cereus ATCC14579, to generate ΔessC mutant through homologous recombination using the homing endonuclease I-SceI mediated markerless gene replacement. Comparatively, we analyzed the culture supernatant of type strain and the ΔessC mutant through Liquid chromatography-tandem mass spectrometry (LC-MS/MS). We further generated T7SSb-specific gene mutations to explore the housekeeping roles of the T7SSb-dependent effectors. The sporulation process of B. cereus ATCC14579 and its mutants was observed microscopically through the classic Schaeffer-Fulton staining method. The spore viability of each strain in this study was established by enumerating the colony-forming units on LB agar.

resultsThrough LC-MS/MS, we identified a pair of nearly identical (94%) effector proteins named EsxA belonging to the sagEsxA-like subfamily of the WXG100 protein superfamily in the culture supernatant of the wild type and none in the ΔessC mutant. Homology analysis of the T7SSb gene cluster among B. cereus strains revealed diversity from the 3' end of essC, encoding additional substrates. Deletions in esxA1 and esxA2 neither altered cellular morphology nor growth rate, but the ΔesxA1ΔesxA2 deletion resulted in significantly fewer viable spores and an overall slower sporulation process. Within 24 h culture, more than 80% of wild-type cells formed endospores compared to less than 5% in the ΔesxA1ΔesxA2 mutant. The maximum spore ratios for the wild type and ΔesxA1ΔesxA2 were 0.96 and 0.72, respectively. Altogether, these results indicated that EsxA1 and EsxA2 work cooperatively and are required for sporulation in B. cereus ATCC14567.

conclusionB. cereus ATCC14579 possesses two nearly identical T7SSb-dependent effectors belonging to the sagEsxA-like proteins. Simultaneous deletion of genes encoding these effectors significantly delayed and reduced sporulation, a novel finding for EsxA.

Indexed as

Bacillus cereusBacterial ProteinsSpores, BacterialType VII Secretion SystemsChromatography, LiquidMutationTandem Mass SpectrometryBacterial ProteinsType VII Secretion SystemsBacillus cereusEsxASporulationType VIIb secretion system

Identifiers

PMID39289639
PMCPMC11406982

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.