Evidence map›Paper›PMID 39289351›Full record

ArticleNature communications2024

Quantifiable blood TCR repertoire components associate with immune aging.

Jing Hu, Mingyao Pan, Brett Reid, Shelley Tworoger, Bo Li

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Review
  6. Is Thymic Involution Truly a Deterioration or an Adaptation?Bulletin of mathematical biology · 2026
    Article
  7. Review
  8. Immunosenescence and susceptibility to respiratory viruses: a state-of-the-art review.European respiratory review : an official journal of the European Respiratory Society · 2026
    Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Aging and immunity: the age-old tango.Genes & development · 2025
    Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jing HuDepartment of Pathology and Laboratory Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
Mingyao PanDepartment of Pathology and Laboratory Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.ORCID 0000-0003-2912-9599
Brett ReidDepartment of Cancer Epidemiology, Moffitt Cancer Center, Tampa, FL, USA.ORCID 0000-0001-9702-257X
Shelley TworogerDepartment of Cancer Epidemiology, Moffitt Cancer Center, Tampa, FL, USA.
Bo LiDepartment of Pathology and Laboratory Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA. lib3@chop.edu.ORCID 0000-0002-8617-900X

Funding

Tracking Peripheral T-Cell Repertoire Changes for Preoperative and Early Ovarian Cancer DiagnosisR01CA258524 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI Jayanthi S Lea, Bo Li · 2022 to 2026
$3.8M
Antigen-independent prediction and biomarker identification of cancer-specific T cellsR01CA245318 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI LI, BO · 2020 to 2024
$1.9M
NCI NIH HHS R01 CA245318NCI NIH HHS R01 CA258524
6 · The paper itself

Abstract

T cell senescence alters the homeostasis of distinct T cell populations and results in decayed adaptive immune protection in older individuals, but a link between aging and dynamic T cell clone changes has not been made. Here, using a newly developed computational framework, Repertoire Functional Units (RFU), we investigate over 6500 publicly available TCR repertoire sequencing samples from multiple human cohorts and identify age-associated RFUs consistently across different cohorts. Quantification of RFU reduction with aging reveals accelerated loss under immunosuppressive conditions. Systematic analysis of age-associated RFUs in clinical samples manifests a potential link between these RFUs and improved clinical outcomes, such as lower ICU admission and reduced risk of complications, during acute viral infections. Finally, patients receiving bone marrow transplantation show a secondary expansion of the age-associated clones upon stem cell transfer from younger donors. Together, our results suggest the existence of a 'TCR clock' that could reflect the immune functions in aging populations.

Indexed as

AgingReceptors, Antigen, T-CellT-LymphocytesAdultAgedAged, 80 and overBone Marrow TransplantationCellular SenescenceFemaleHumansMaleMiddle AgedYoung AdultReceptors, Antigen, T-Cell

Identifiers

PMID39289351
PMCPMC11408526

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.