Evidence map›Paper›PMID 39288765›Full record

ArticleAmerican journal of human genetics2024

The BabySeq Project: A clinical trial of genome sequencing in a diverse cohort of infants.

Hadley Stevens Smith, Bethany Zettler, Casie A Genetti, Madison R Hickingbotham, Tanner F Coleman, Matthew Lebo, Anna Nagy, Hana Zouk, Lisa Mahanta, Kurt D Christensen and 14 more

Abstract read
In one paragraph

Article in American journal of human genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

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  19. Data-driven consideration of genetic disorders for global genomic newborn screening programs.Genetics in medicine : official journal of the American College of Medical Genetics · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors.

Hadley Stevens SmithDepartment of Population Medicine, Precision Medicine Translational Research (PROMoTeR) Center, Harvard Medical School and Harvard Pilgrim Health Care Institute, Boston, MA 02215, USA; Center for Bioethics, Harvard Medical School, Boston, MA 02215, USA.
Bethany ZettlerDepartment of Medicine, Mass General Brigham, Boston, MA 02115, USA; Ariadne Labs, Boston, MA 02215, USA.
Casie A GenettiDivision of Genetics and Genomics, Manton Center for Orphan Disease Research, Boston Children's Hospital, Boston, MA 02115, USA.
Madison R HickingbothamDepartment of Population Medicine, Harvard Pilgrim Health Care Institute, Boston, MA 02215, USA.
Tanner F ColemanHudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA.
Matthew LeboLaboratory for Molecular Medicine, Mass General Brigham Personalized Medicine, Boston, MA 02139, USA; Department of Pathology, Massachusetts General Hospital, Harvard Medical School, Boston, MA 02215, USA; Broad Institute of Harvard and MIT, Cambridge, MA, USA.
Anna NagyLaboratory for Molecular Medicine, Mass General Brigham Personalized Medicine, Boston, MA 02139, USA.
Hana ZoukLaboratory for Molecular Medicine, Mass General Brigham Personalized Medicine, Boston, MA 02139, USA; Department of Pathology, Massachusetts General Hospital, Harvard Medical School, Boston, MA 02215, USA; Broad Institute of Harvard and MIT, Cambridge, MA, USA.
Lisa MahantaLaboratory for Molecular Medicine, Mass General Brigham Personalized Medicine, Boston, MA 02139, USA.
Kurt D ChristensenDepartment of Population Medicine, Precision Medicine Translational Research (PROMoTeR) Center, Harvard Medical School and Harvard Pilgrim Health Care Institute, Boston, MA 02215, USA; Broad Institute of Harvard and MIT, Cambridge, MA, USA.
Stacey PereiraCenter for Medical Ethics & Health Policy, Baylor College of Medicine, Houston, TX 77030, USA.
Nidhi D ShahDivision of Genetics and Genomics, Manton Center for Orphan Disease Research, Boston Children's Hospital, Boston, MA 02115, USA; Broad Institute of Harvard and MIT, Cambridge, MA, USA; Dartmouth Health Children's, Lebanon, NH 03756, USA.
Nina B GoldMassachusetts General Hospital for Children, Division of Medical Genetics and Metabolism, Boston, MA 02114, USA; Harvard Medical School, Department of Pediatrics, Boston, MA 02115, USA.
Sheyenne WalmsleyDepartment of Medicine, Mass General Brigham, Boston, MA 02115, USA; Ariadne Labs, Boston, MA 02215, USA.
Sarita EdwardsThe E.WE Foundation, Huntsville, AL 35813, USA.
Ramin HomayouniDepartment of Foundational Medical Studies, Oakland University William Beaumont School of Medicine, Rochester, MI 48309, USA.
Graham P KrasanDepartment of Pediatrics, Corewell Health William Beaumont University Hospital, Royal Oak, MI 48073, USA.
Hakon HakonarsonCenter for Applied Genomics, The Joseph Stokes Jr. Research Institute of Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA.
Carol R HorowitzDepartment of Population Health Science and Policy, Institute for Health Equity Research, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Bruce D GelbMindich Child Health and Development Institute and the Departments of Pediatrics and Genetics & Genomic Sciences Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Bruce R KorfDepartment of Genetics, UAB Heersink School of Medicine, Birmingham, AL 35233, USA.
Amy L McGuireCenter for Medical Ethics & Health Policy, Baylor College of Medicine, Houston, TX 77030, USA.
Ingrid A HolmDivision of Genetics and Genomics, Manton Center for Orphan Disease Research, Boston Children's Hospital, Boston, MA 02115, USA; Harvard Medical School, Department of Pediatrics, Boston, MA 02115, USA. Electronic address: ingrid.holm@childrens.harvard.edu.
Robert C GreenDepartment of Medicine, Mass General Brigham, Boston, MA 02115, USA; Ariadne Labs, Boston, MA 02215, USA; Broad Institute of Harvard and MIT, Cambridge, MA, USA.

Funding

Implementation of Whole Genome Sequencing as Screening in a Diverse Cohort of Healthy InfantsU01TR003201 · NCATS · BRIGHAM AND WOMEN'S HOSPITAL · PI GREEN, ROBERT C., HOLM, INGRID ADELE · 2021 to 2024
$5.1M
Heterogeneity of preferences for and outcomes of pediatric genomic sequencing by race and ethnicityR00HG011491 · NHGRI · HARVARD PILGRIM HEALTH CARE, INC. · PI SMITH, HADLEY STEVENS · 2023 to 2025
$814k
NCATS NIH HHS U01 TR003201NHGRI NIH HHS R00 HG011491
6 · The paper itself

Abstract

Efforts to implement and evaluate genome sequencing (GS) as a screening tool for newborns and infants are expanding worldwide. The first iteration of the BabySeq Project (2015-2019), a randomized controlled trial of newborn sequencing, produced novel evidence on medical, behavioral, and economic outcomes. The second iteration of BabySeq, which began participant recruitment in January 2023, examines GS outcomes in a larger, more diverse cohort of more than 500 infants up to one year of age recruited from pediatric clinics at several sites across the United States. The trial aims for families who self-identify as Black/African American or Hispanic/Latino to make up more than 50% of final enrollment, and key aspects of the trial design were co-developed with a community advisory board. All enrolled families receive genetic counseling and a family history report. Half of enrolled infants are randomized to receive GS with comprehensive interpretation of pathogenic and likely pathogenic variants in more than 4,300 genes associated with childhood-onset and actionable adult-onset conditions, as well as larger-scale chromosomal copy number variants classified as pathogenic or likely pathogenic. GS result reports include variants associated with disease (Mendelian disease risks) and carrier status of autosomal-recessive and X-linked disorders. Investigators evaluate the utility and impacts of implementing a GS screening program in a diverse cohort of infants using medical record review and longitudinal parent surveys. In this perspective, we describe the rationale for the second iteration of the BabySeq Project, the outcomes being assessed, and the key decisions collaboratively made by the study team and community advisory board.

Indexed as

Whole Genome SequencingCohort StudiesFemaleGenetic CounselingGenetic TestingGenome, HumanHumansInfantInfant, NewbornMaleMulticenter Studies as TopicNeonatal ScreeningRandomized Controlled Trials as Topic

Identifiers

PMID39288765
PMCPMC11480845

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.